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CAZyme Information: MGYG000003497_00121

You are here: Home > Sequence: MGYG000003497_00121

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RF16 sp900768725
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Paludibacteraceae; RF16; RF16 sp900768725
CAZyme ID MGYG000003497_00121
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
629 MGYG000003497_18|CGC1 69256.46 4.6408
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003497 1691378 MAG Fiji Oceania
Gene Location Start: 19261;  End: 21150  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003497_00121.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 116 325 5.3e-60 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 1.24e-06 130 291 17 168
Amb_all domain.
COG3866 PelB 9.59e-05 46 331 22 279
Pectate lyase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT75604.1 1.45e-140 50 560 32 532
AEV99914.1 2.19e-85 55 560 30 468
QGW28869.1 4.71e-85 48 558 14 457
ALJ01754.1 1.38e-84 55 561 18 461
QNA45667.1 9.69e-84 55 558 23 457

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5B297 6.00e-31 50 560 16 410
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q0CLG7 6.64e-30 50 560 16 413
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
B8NQQ7 5.54e-29 51 560 17 413
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 1.86e-28 51 560 17 413
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
B0XMA2 3.44e-28 50 560 17 414
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.073733 0.923782 0.001634 0.000303 0.000256 0.000275

TMHMM  Annotations      download full data without filtering help

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32 54