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CAZyme Information: MGYG000003506_00400

You are here: Home > Sequence: MGYG000003506_00400

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Cyanobacteria; Vampirovibrionia; Gastranaerophilales; Gastranaerophilaceae; CAG-196;
CAZyme ID MGYG000003506_00400
CAZy Family GT5
CAZyme Description Glycogen synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
479 55156.84 5.5389
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003506 1361363 MAG Fiji Oceania
Gene Location Start: 562;  End: 2001  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003506_00400.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT5 2 476 9.7e-162 0.9957627118644068

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd03791 GT5_Glycogen_synthase_DULL1-like 0.0 2 477 1 474
Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
PRK00654 glgA 0.0 1 479 1 464
glycogen synthase GlgA.
TIGR02095 glgA 0.0 1 477 1 472
glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
COG0297 GlgA 4.13e-158 1 479 1 479
Glycogen synthase [Carbohydrate transport and metabolism].
PRK14099 PRK14099 1.12e-92 1 479 4 480
glycogen synthase GlgA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AOR37764.1 7.37e-289 1 478 1 478
QKJ95860.1 3.33e-128 1 475 1 480
AEH51958.1 2.50e-127 1 479 1 481
AFH47756.1 3.77e-127 1 475 1 480
AAD35976.1 2.57e-124 1 479 1 481

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3D1J_A 1.33e-73 1 475 1 473
ChainA, Glycogen synthase [Escherichia coli]
2QZS_A 2.29e-73 1 475 1 473
CrystalStructure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSb) [Escherichia coli],2R4T_A Crystal Structure of Wild-type E.coli GS in Complex with ADP and Glucose(wtGSc) [Escherichia coli],2R4U_A Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSd) [Escherichia coli],3GUH_A Crystal Structure of Wild-type E.coli GS in complex with ADP and DGM [Escherichia coli K-12]
3COP_A 1.75e-72 1 475 1 473
ChainA, Glycogen synthase [Escherichia coli],3CX4_A Chain A, Glycogen synthase [Escherichia coli]
6GNE_A 4.63e-71 3 479 12 498
Catalyticdomain of Starch Synthase IV from Arabidopsis thaliana bound to ADP and acarbose [Arabidopsis thaliana],6GNE_B Catalytic domain of Starch Synthase IV from Arabidopsis thaliana bound to ADP and acarbose [Arabidopsis thaliana]
1RZU_A 2.14e-69 1 479 1 476
ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZU_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9WZZ7 5.14e-125 1 479 1 481
Glycogen synthase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=glgA PE=3 SV=1
A5IIN8 2.33e-123 1 479 1 481
Glycogen synthase OS=Thermotoga petrophila (strain ATCC BAA-488 / DSM 13995 / JCM 10881 / RKU-1) OX=390874 GN=glgA PE=3 SV=1
B1LC39 2.33e-123 1 479 1 481
Glycogen synthase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=glgA PE=3 SV=1
A6LJ53 9.00e-122 1 476 1 474
Glycogen synthase OS=Thermosipho melanesiensis (strain DSM 12029 / CIP 104789 / BI429) OX=391009 GN=glgA PE=3 SV=1
A8F720 2.38e-120 1 479 1 481
Glycogen synthase OS=Pseudothermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / NBRC 107922 / TMO) OX=416591 GN=glgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000047 0.000004 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003506_00400.