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CAZyme Information: MGYG000003512_01341
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA11524 sp900769075 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; CAG-74; UBA11524; UBA11524 sp900769075 | |||||||||||
| CAZyme ID | MGYG000003512_01341 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 9047; End: 10477 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.67e-17 | 191 | 428 | 199 | 399 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN03003 | PLN03003 | 1.97e-07 | 191 | 308 | 95 | 217 | Probable polygalacturonase At3g15720 |
| PLN02793 | PLN02793 | 1.00e-06 | 195 | 306 | 128 | 254 | Probable polygalacturonase |
| PLN03010 | PLN03010 | 1.75e-06 | 189 | 306 | 118 | 234 | polygalacturonase |
| pfam00295 | Glyco_hydro_28 | 8.11e-06 | 232 | 308 | 86 | 167 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QTH41144.1 | 1.48e-121 | 3 | 475 | 14 | 489 |
| AZS17007.1 | 2.91e-117 | 4 | 475 | 14 | 487 |
| QNK57055.1 | 8.88e-115 | 4 | 466 | 13 | 477 |
| QJD84919.1 | 9.33e-115 | 4 | 473 | 23 | 494 |
| APA66227.1 | 8.36e-66 | 33 | 454 | 32 | 478 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 4.94e-10 | 149 | 357 | 77 | 330 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 3JUR_A | 1.91e-08 | 229 | 308 | 186 | 267 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9LW07 | 8.04e-08 | 191 | 308 | 95 | 217 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
| Q9SFB7 | 2.39e-07 | 195 | 455 | 140 | 414 | Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2 |
| Q7M1E7 | 2.71e-07 | 240 | 321 | 192 | 274 | Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1 |
| Q9FY19 | 4.71e-07 | 240 | 306 | 193 | 261 | Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.997358 | 0.002651 | 0.000016 | 0.000005 | 0.000002 | 0.000004 |