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CAZyme Information: MGYG000003513_00606

You are here: Home > Sequence: MGYG000003513_00606

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900769055
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900769055
CAZyme ID MGYG000003513_00606
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1329 141563.41 4.5699
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003513 2720584 MAG Fiji Oceania
Gene Location Start: 1012;  End: 5001  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003513_00606.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 80 257 4.2e-49 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00063 FN3 1.92e-10 437 525 4 93
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
PRK15319 PRK15319 2.96e-09 533 1045 611 1054
fibronectin-binding autotransporter adhesin ShdA.
smart00060 FN3 7.02e-09 437 510 4 82
Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
COG4625 COG4625 2.75e-06 898 1010 59 161
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown].
pfam00041 fn3 7.14e-06 446 509 12 80
Fibronectin type III domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEV97716.1 1.28e-236 10 940 17 971
QCD38445.1 8.44e-127 10 525 7 561
QUT73817.1 8.45e-127 6 530 3 561
QUT74519.1 1.52e-126 24 502 23 515
QCP72135.1 6.67e-122 10 525 7 561

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DPF0 1.49e-109 27 425 22 414
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 3.83e-107 27 425 22 414
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 5.30e-107 27 425 22 414
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B8NQQ7 3.44e-104 27 425 21 413
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 2.34e-102 27 425 21 413
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001145 0.974360 0.023712 0.000277 0.000234 0.000227

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003513_00606.