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CAZyme Information: MGYG000003514_00322
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fibrobacter_A intestinalis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Fibrobacterota; Fibrobacteria; Fibrobacterales; Fibrobacteraceae; Fibrobacter_A; Fibrobacter_A intestinalis | |||||||||||
| CAZyme ID | MGYG000003514_00322 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 24088; End: 26559 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 302 | 485 | 7.2e-24 | 0.8465346534653465 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| smart00656 | Amb_all | 2.62e-17 | 308 | 484 | 12 | 185 | Amb_all domain. |
| COG3866 | PelB | 7.96e-11 | 266 | 556 | 30 | 342 | Pectate lyase [Carbohydrate transport and metabolism]. |
| pfam17957 | Big_7 | 1.36e-04 | 589 | 636 | 17 | 64 | Bacterial Ig domain. This entry represents a bacterial ig-like domain that is found in glycosyl hydrolase enzymes. |
| pfam16640 | Big_3_5 | 0.006 | 587 | 662 | 8 | 89 | Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ACX75579.1 | 1.45e-266 | 16 | 813 | 28 | 782 |
| ADL24590.1 | 1.56e-266 | 16 | 813 | 30 | 784 |
| AUX29593.1 | 1.27e-62 | 19 | 559 | 47 | 571 |
| CAN95071.1 | 2.45e-55 | 24 | 559 | 74 | 584 |
| AZZ92692.1 | 2.91e-36 | 202 | 554 | 197 | 521 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1QCX_A | 2.00e-13 | 197 | 455 | 7 | 251 | PectinLyase B [Aspergillus niger] |
| 1IDK_A | 1.13e-11 | 196 | 456 | 6 | 252 | PectinLyase A [Aspergillus niger] |
| 1IDJ_A | 6.32e-11 | 196 | 456 | 6 | 252 | PectinLyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q5B3J8 | 3.20e-17 | 199 | 497 | 28 | 305 | Probable pectin lyase F OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelF PE=3 SV=1 |
| Q0CZD4 | 8.26e-17 | 196 | 460 | 26 | 276 | Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1 |
| Q2UJA7 | 1.33e-13 | 199 | 460 | 29 | 277 | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2 |
| B8N316 | 1.33e-13 | 199 | 460 | 29 | 277 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
| A2R6A1 | 1.59e-12 | 199 | 456 | 30 | 274 | Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelF PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000325 | 0.999026 | 0.000166 | 0.000167 | 0.000146 | 0.000148 |