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CAZyme Information: MGYG000003514_02435

You are here: Home > Sequence: MGYG000003514_02435

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fibrobacter_A intestinalis
Lineage Bacteria; Fibrobacterota; Fibrobacteria; Fibrobacterales; Fibrobacteraceae; Fibrobacter_A; Fibrobacter_A intestinalis
CAZyme ID MGYG000003514_02435
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
558 63943.66 9.072
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003514 2933446 MAG Fiji Oceania
Gene Location Start: 1155;  End: 2831  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003514_02435.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 213 515 1.4e-72 0.9702970297029703

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 1.84e-62 259 513 2 263
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 3.54e-58 218 515 11 310
Glycosyl hydrolase family 10.
COG3693 XynA 1.42e-40 253 513 62 337
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam02018 CBM_4_9 0.008 27 159 2 131
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABU45485.1 0.0 29 558 27 549
ACX76572.1 0.0 29 558 27 549
ABG59368.1 1.82e-96 25 546 20 552
CCW34445.1 6.59e-64 47 547 33 563
AHM62801.1 5.70e-63 184 555 33 407

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7D88_A 3.08e-46 179 546 41 395
ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)]
7D89_A 1.51e-44 179 546 41 395
ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)]
6D5C_A 7.95e-31 278 496 88 323
Structureof Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_B Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_C Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii]
5OFJ_A 8.83e-31 278 515 76 337
Crystalstructure of N-terminal domain of bifunctional CbXyn10C [Caldicellulosiruptor bescii DSM 6725]
1XYZ_A 1.03e-30 253 513 67 340
ChainA, 1,4-BETA-D-XYLAN-XYLANOHYDROLASE [Acetivibrio thermocellus],1XYZ_B Chain B, 1,4-BETA-D-XYLAN-XYLANOHYDROLASE [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A3DH97 4.57e-41 175 547 373 731
Anti-sigma-I factor RsgI6 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsgI6 PE=1 SV=1
A0A1P8AWH8 1.98e-40 23 546 393 913
Endo-1,4-beta-xylanase 1 OS=Arabidopsis thaliana OX=3702 GN=XYN1 PE=1 SV=1
Q12603 1.49e-35 241 494 57 321
Beta-1,4-xylanase OS=Dictyoglomus thermophilum OX=14 GN=xynA PE=3 SV=1
F4JG10 4.59e-34 33 546 201 721
Endo-1,4-beta-xylanase 3 OS=Arabidopsis thaliana OX=3702 GN=XYN3 PE=2 SV=1
O80596 5.42e-33 205 551 712 1043
Endo-1,4-beta-xylanase 2 OS=Arabidopsis thaliana OX=3702 GN=XYN2 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000265 0.999138 0.000159 0.000163 0.000134 0.000129

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003514_02435.