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CAZyme Information: MGYG000003528_02368

You are here: Home > Sequence: MGYG000003528_02368

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAAGGB01 sp900769285
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; UBA1407; UBA1407; CAAGGB01; CAAGGB01 sp900769285
CAZyme ID MGYG000003528_02368
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
489 MGYG000003528_297|CGC1 55850.77 6.2923
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003528 3662993 MAG Fiji Oceania
Gene Location Start: 5098;  End: 6567  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003528_02368.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 59 440 5.7e-48 0.9603960396039604

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 2.54e-38 138 439 17 263
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 9.06e-36 140 439 62 308
Glycosyl hydrolase family 10.
COG3693 XynA 5.33e-28 134 444 79 342
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM47074.1 2.12e-250 11 483 17 490
AHF92621.1 3.35e-236 6 488 12 490
QQZ02681.1 1.97e-204 6 481 19 487
QGA28189.1 4.63e-200 4 476 20 491
AWI10666.1 9.06e-183 12 488 1 479

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FHE_A 1.60e-19 140 439 73 338
Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct]
4W8L_A 6.71e-18 55 441 7 343
Structureof GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_B Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_C Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis]
2DEP_A 1.00e-16 140 441 66 342
CrystalStructure of xylanase B from Clostridium stercorarium F9 [Thermoclostridium stercorarium],2DEP_B Crystal Structure of xylanase B from Clostridium stercorarium F9 [Thermoclostridium stercorarium]
3W24_A 6.51e-16 140 442 69 326
Thehigh-resolution crystal structure of TsXylA, intracellular xylanase from Thermoanaerobacterium saccharolyticum JW/SL-YS485 [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
2CNC_A 3.19e-15 131 442 88 377
Family10 xylanase [Cellvibrio mixtus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O69230 1.38e-16 55 447 373 720
Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis OX=198119 GN=xynC PE=1 SV=1
P40944 9.76e-15 140 441 415 677
Endo-1,4-beta-xylanase A OS=Caldicellulosiruptor sp. (strain Rt8B.4) OX=28238 GN=xynA PE=3 SV=1
P36917 5.21e-14 140 441 418 674
Endo-1,4-beta-xylanase A OS=Thermoanaerobacterium saccharolyticum OX=28896 GN=xynA PE=1 SV=1
P38535 8.93e-14 140 441 270 526
Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1
C6CRV0 9.76e-14 138 441 576 850
Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999652 0.000332 0.000006 0.000001 0.000000 0.000006

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003528_02368.