dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000003530_00669

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Basic Information help

Species

RC9 sp004554455

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp004554455

CAZyme ID

MGYG000003530_00669

CAZy Family

GH78

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
744	MGYG000003530_42\|CGC1	83012.01	4.5605

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003530	2130921	MAG	Fiji	Oceania

Gene Location

Start: 22776; End: 25010 Strand: -

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000003530_00669.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH78	168	383	7.7e-23	0.3551587301587302

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	1.33e-12	154	295	91	222	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
COG3408	GDB1	1.79e-12	113	474	281	641	Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].
cd04083	CBM35_Lmo2446-like	8.31e-11	618	726	21	121	Carbohydrate Binding Module 35 (CBM35) domains similar to Lmo2446. This family includes carbohydrate binding module 35 (CBM35) domains that are appended to several carbohydrate binding enzymes. Some CBM35 domains belonging to this family are appended to glycoside hydrolase (GH) family domains, including glycoside hydrolase family 31 (GH31), for example the CBM35 domain of Lmo2446, an uncharacterized protein from Listeria monocytogenes EGD-e. These CBM35s are non-catalytic carbohydrate binding domains that facilitate the strong binding of the GH catalytic modules with their dedicated, insoluble substrates. GH31 has a wide range of hydrolytic activities such as alpha-glucosidase, alpha-xylosidase, 6-alpha-glucosyltransferase, or alpha-1,4-glucan lyase, cleaving a terminal carbohydrate moiety from a substrate that may be a starch or a glycoprotein. Most characterized GH31 enzymes are alpha-glucosidases.
pfam06202	GDE_C	1.28e-09	164	425	82	370	Amylo-alpha-1,6-glucosidase. This family includes human glycogen branching enzyme AGL. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homolog GDB1 that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (EC:3.2.1.33).
pfam01204	Trehalase	1.15e-07	249	337	312	397	Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QDA62675.1	2.89e-241	30	737	159	878
QNE41784.1	6.63e-240	30	738	174	890
AHJ97374.1	3.14e-232	52	737	208	899
QJX46424.1	2.35e-228	30	737	189	907
QEC42842.1	1.94e-226	52	738	201	893

PDB Hits help

has no PDB hit.

Swiss-Prot Hits help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000000	1.000076	0.000000	0.000000	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000003530_00669.