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CAZyme Information: MGYG000003532_00623
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | W0P28-013 sp004557405 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Paludibacteraceae; W0P28-013; W0P28-013 sp004557405 | |||||||||||
| CAZyme ID | MGYG000003532_00623 | |||||||||||
| CAZy Family | GH114 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 180470; End: 181423 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH114 | 197 | 314 | 7.1e-17 | 0.5263157894736842 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG2342 | COG2342 | 3.89e-45 | 177 | 317 | 21 | 155 | Endo alpha-1,4 polygalactosaminidase, GH114 family (was erroneously annotated as Cys-tRNA synthetase) [Carbohydrate transport and metabolism]. |
| TIGR01370 | TIGR01370 | 2.23e-40 | 190 | 315 | 55 | 174 | extracellular protein. Original assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by but challenged by and by subsequent discovery of the actual mechanism for synthesizing Cys-tRNA in species where a direct Cys--tRNA ligase was not found. Lingering legacy annotations of members of this family probably should be removed. Evidence against the role includes a signal peptide. This family as been renamed "extracellular protein" to facilitate correction. Members of this family occur in Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal). A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases. The function remains unknown. [Unknown function, General] |
| TIGR01370 | TIGR01370 | 9.49e-14 | 26 | 152 | 186 | 308 | extracellular protein. Original assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by but challenged by and by subsequent discovery of the actual mechanism for synthesizing Cys-tRNA in species where a direct Cys--tRNA ligase was not found. Lingering legacy annotations of members of this family probably should be removed. Evidence against the role includes a signal peptide. This family as been renamed "extracellular protein" to facilitate correction. Members of this family occur in Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal). A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases. The function remains unknown. [Unknown function, General] |
| COG2342 | COG2342 | 5.56e-11 | 26 | 161 | 166 | 294 | Endo alpha-1,4 polygalactosaminidase, GH114 family (was erroneously annotated as Cys-tRNA synthetase) [Carbohydrate transport and metabolism]. |
| pfam03537 | Glyco_hydro_114 | 3.00e-08 | 192 | 314 | 6 | 113 | Glycoside-hydrolase family GH114. This family is recognized as a glycosyl-hydrolase family, number 114. It is endo-alpha-1,4-polygalactosaminidase, a rare enzyme. It is proposed to be TIM-barrel, the most common structure amongst the catalytic domains of glycosyl-hydrolases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWI26448.1 | 3.19e-132 | 6 | 317 | 9 | 320 |
| AWA30637.1 | 3.42e-132 | 6 | 317 | 11 | 322 |
| AYB35484.1 | 3.95e-131 | 22 | 317 | 27 | 324 |
| QEE50371.1 | 1.25e-129 | 23 | 317 | 39 | 332 |
| ALM48074.1 | 3.99e-129 | 7 | 317 | 6 | 326 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2AAM_A | 6.46e-26 | 195 | 315 | 35 | 149 | Crystalstructure of a putative glycosidase (tm1410) from thermotoga maritima at 2.20 A resolution [Thermotoga maritima],2AAM_B Crystal structure of a putative glycosidase (tm1410) from thermotoga maritima at 2.20 A resolution [Thermotoga maritima],2AAM_C Crystal structure of a putative glycosidase (tm1410) from thermotoga maritima at 2.20 A resolution [Thermotoga maritima],2AAM_D Crystal structure of a putative glycosidase (tm1410) from thermotoga maritima at 2.20 A resolution [Thermotoga maritima],2AAM_E Crystal structure of a putative glycosidase (tm1410) from thermotoga maritima at 2.20 A resolution [Thermotoga maritima],2AAM_F Crystal structure of a putative glycosidase (tm1410) from thermotoga maritima at 2.20 A resolution [Thermotoga maritima] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q58872 | 7.01e-31 | 163 | 315 | 53 | 197 | Uncharacterized protein MJ1477 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1477 PE=4 SV=1 |
| Q9RWG3 | 1.83e-27 | 189 | 314 | 62 | 178 | Uncharacterized protein DR_0705 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) OX=243230 GN=DR_0705 PE=4 SV=1 |
| Q9X1D0 | 4.48e-25 | 195 | 315 | 49 | 163 | Uncharacterized protein TM_1410 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_1410 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000000 | 0.000001 | 1.000064 | 0.000000 | 0.000000 | 0.000000 |