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CAZyme Information: MGYG000003536_00453

You are here: Home > Sequence: MGYG000003536_00453

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312;
CAZyme ID MGYG000003536_00453
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
379 41547.53 8.7069
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003536 1804941 MAG Fiji Oceania
Gene Location Start: 908;  End: 2047  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003536_00453.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 113 339 1.2e-19 0.6369230769230769

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 6.30e-10 6 339 72 397
Polygalacturonase [Carbohydrate transport and metabolism].
pfam13229 Beta_helix 0.010 148 276 2 119
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AWO01000.1 7.61e-116 26 357 5 331
APZ82864.1 8.23e-31 17 357 14 339
BBZ75998.1 1.20e-06 148 300 159 287

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002440 0.996247 0.000303 0.000386 0.000305 0.000320

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003536_00453.