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CAZyme Information: MGYG000003536_00591

You are here: Home > Sequence: MGYG000003536_00591

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312;
CAZyme ID MGYG000003536_00591
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
383 MGYG000003536_173|CGC1 39996.82 9.9672
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003536 1804941 MAG Fiji Oceania
Gene Location Start: 28;  End: 1179  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003536_00591.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM50 127 170 1.5e-17 0.975

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK06347 PRK06347 6.33e-26 124 326 330 549
1,4-beta-N-acetylmuramoylhydrolase.
PRK06347 PRK06347 7.72e-23 125 306 406 591
1,4-beta-N-acetylmuramoylhydrolase.
PRK10783 mltD 5.64e-16 96 244 320 453
membrane-bound lytic murein transglycosylase D; Provisional
cd00118 LysM 6.11e-16 125 169 1 45
Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
smart00257 LysM 1.52e-14 126 169 1 44
Lysin motif.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNU67820.1 8.54e-25 112 308 448 640
AKC81945.1 3.35e-24 127 333 7 203
QRO02433.1 1.07e-21 96 313 6 194
AFY00757.1 4.86e-21 50 308 242 516
AHZ86360.1 6.71e-21 50 308 250 522

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P37710 1.04e-13 96 311 333 545
Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2
Q8CMN2 3.99e-12 127 309 29 193
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=sle1 PE=3 SV=1
Q5HRU2 3.99e-12 127 309 29 193
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=sle1 PE=3 SV=1
Q49UX4 1.08e-09 127 306 29 193
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=sle1 PE=3 SV=1
O31852 1.53e-09 123 293 25 188
D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000003 1.000069 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

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