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CAZyme Information: MGYG000003546_00571

You are here: Home > Sequence: MGYG000003546_00571

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1181 sp900769555
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Paludibacteraceae; UBA1181; UBA1181 sp900769555
CAZyme ID MGYG000003546_00571
CAZy Family CBM22
CAZyme Description Endo-1,4-beta-xylanase Y
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
598 67960.17 4.6179
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003546 3032937 MAG Fiji Oceania
Gene Location Start: 14114;  End: 15910  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 177 509 7.4e-89 0.9900990099009901
CBM22 29 148 2.4e-28 0.9465648854961832

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00331 Glyco_hydro_10 2.19e-100 177 509 1 310
Glycosyl hydrolase family 10.
smart00633 Glyco_10 1.11e-85 248 507 20 263
Glycosyl hydrolase family 10.
COG3693 XynA 1.78e-58 207 509 56 339
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam02018 CBM_4_9 4.88e-15 23 152 1 134
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBL16579.1 5.80e-142 30 515 45 540
BCJ96140.1 4.20e-126 30 514 39 550
CAB65753.1 2.94e-124 56 512 68 533
BAA21516.2 3.45e-124 22 511 30 545
ANV77297.1 3.45e-124 22 511 30 545

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2W5F_A 8.13e-111 21 507 20 524
ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2W5F_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus]
2WYS_A 1.09e-107 31 507 30 524
ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WYS_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_A Chain A, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus]
5OFJ_A 5.17e-56 173 510 4 338
Crystalstructure of N-terminal domain of bifunctional CbXyn10C [Caldicellulosiruptor bescii DSM 6725]
6D5C_A 6.95e-56 185 510 31 350
Structureof Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_B Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_C Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii]
5OFK_A 3.79e-55 173 510 4 338
Crystalstructure of CbXyn10C variant E140Q/E248Q complexed with xyloheptaose [Caldicellulosiruptor bescii DSM 6725],5OFL_A Crystal structure of CbXyn10C variant E140Q/E248Q complexed with cellohexaose [Caldicellulosiruptor bescii DSM 6725]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P51584 1.72e-105 31 507 41 535
Endo-1,4-beta-xylanase Y OS=Acetivibrio thermocellus OX=1515 GN=xynY PE=1 SV=1
P29126 3.34e-99 177 508 630 950
Bifunctional endo-1,4-beta-xylanase XylA OS=Ruminococcus flavefaciens OX=1265 GN=xynA PE=3 SV=1
Q60037 5.75e-79 31 508 211 690
Endo-1,4-beta-xylanase A OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=xynA PE=1 SV=1
Q60042 3.77e-78 31 508 206 686
Endo-1,4-beta-xylanase A OS=Thermotoga neapolitana OX=2337 GN=xynA PE=1 SV=1
P36917 1.60e-62 34 517 207 682
Endo-1,4-beta-xylanase A OS=Thermoanaerobacterium saccharolyticum OX=28896 GN=xynA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000248 0.998990 0.000223 0.000189 0.000177 0.000170

TMHMM  Annotations      download full data without filtering help

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