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CAZyme Information: MGYG000003553_00168
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | HGM05376 sp900769785 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; P3; HGM05376; HGM05376 sp900769785 | |||||||||||
| CAZyme ID | MGYG000003553_00168 | |||||||||||
| CAZy Family | GT30 | |||||||||||
| CAZyme Description | 3-deoxy-D-manno-octulosonic acid transferase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2653; End: 3894 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT30 | 46 | 208 | 1.6e-41 | 0.9378531073446328 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG1519 | KdtA | 8.74e-55 | 1 | 411 | 1 | 416 | 3-deoxy-D-manno-octulosonic-acid transferase [Cell wall/membrane/envelope biogenesis]. |
| PRK05749 | PRK05749 | 1.34e-48 | 1 | 411 | 2 | 418 | 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed |
| pfam04413 | Glycos_transf_N | 5.99e-48 | 45 | 208 | 9 | 176 | 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family. |
| cd03789 | GT9_LPS_heptosyltransferase | 0.004 | 57 | 169 | 8 | 116 | lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AHW59437.1 | 8.80e-137 | 1 | 407 | 1 | 405 |
| QHT68241.1 | 1.08e-136 | 2 | 413 | 3 | 412 |
| QXU42020.1 | 1.76e-133 | 1 | 410 | 1 | 404 |
| BAX80324.1 | 1.29e-132 | 1 | 410 | 1 | 407 |
| QDW28079.1 | 1.32e-130 | 1 | 410 | 1 | 404 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2XCI_A | 2.58e-21 | 30 | 377 | 17 | 342 | Membrane-embeddedmonofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCU_A Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B0B9V8 | 6.34e-24 | 40 | 412 | 46 | 424 | 3-deoxy-D-manno-octulosonic acid transferase OS=Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B) OX=471472 GN=waaA PE=1 SV=1 |
| P0CE14 | 6.34e-24 | 40 | 412 | 46 | 424 | 3-deoxy-D-manno-octulosonic acid transferase OS=Chlamydia trachomatis (strain D/UW-3/Cx) OX=272561 GN=waaA PE=3 SV=1 |
| Q3KMF4 | 8.62e-24 | 40 | 412 | 46 | 424 | 3-deoxy-D-manno-octulosonic acid transferase OS=Chlamydia trachomatis serovar A (strain ATCC VR-571B / DSM 19440 / HAR-13) OX=315277 GN=waaA PE=3 SV=1 |
| F0T4D1 | 1.02e-22 | 48 | 371 | 57 | 385 | 3-deoxy-D-manno-octulosonic acid transferase OS=Chlamydophila psittaci (strain ATCC VR-125 / 6BC) OX=331636 GN=waaA PE=1 SV=1 |
| Q9PKI5 | 1.83e-22 | 40 | 412 | 45 | 423 | 3-deoxy-D-manno-octulosonic acid transferase OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=waaA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.629789 | 0.366447 | 0.001425 | 0.000695 | 0.000484 | 0.001170 |