logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003556_01581

You are here: Home > Sequence: MGYG000003556_01581

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes sp900769745
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes sp900769745
CAZyme ID MGYG000003556_01581
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
435 50905.99 6.7614
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003556 2131277 MAG Fiji Oceania
Gene Location Start: 532;  End: 1839  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003556_01581.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 59 427 1.3e-36 0.4308510638297872

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 5.81e-25 71 426 118 476
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 1.92e-21 69 426 88 433
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK09525 lacZ 1.25e-19 322 426 390 489
beta-galactosidase.
pfam02836 Glyco_hydro_2_C 1.04e-17 325 426 58 162
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
pfam00703 Glyco_hydro_2 2.05e-05 163 272 3 105
Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBL15391.1 1.27e-148 1 434 1 431
BBL03281.1 1.27e-148 1 434 1 431
AFL78621.1 7.05e-144 14 435 33 452
BBL07145.1 4.51e-143 20 435 32 445
BBL11042.1 5.89e-143 23 435 43 453

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3DEC_A 1.53e-21 92 435 152 496
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
6SD0_A 5.09e-20 81 427 129 469
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
6S6Z_A 5.09e-20 81 427 128 468
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
3VD5_A 1.58e-17 86 427 173 518
E.coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_B E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_C E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_D E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD7_A E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_B E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_C E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_D E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD9_A E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_B E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_C E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_D E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],4DUX_A E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_B E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_C E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_D E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12]
6CVM_A 2.09e-17 86 427 143 488
Atomicresolution cryo-EM structure of beta-galactosidase [Escherichia coli K-12],6CVM_B Atomic resolution cryo-EM structure of beta-galactosidase [Escherichia coli K-12],6CVM_C Atomic resolution cryo-EM structure of beta-galactosidase [Escherichia coli K-12],6CVM_D Atomic resolution cryo-EM structure of beta-galactosidase [Escherichia coli K-12],6X1Q_A 1.8 Angstrom resolution structure of b-galactosidase with a 200 kV cryoARM electron microscope [Escherichia coli K-12],6X1Q_B 1.8 Angstrom resolution structure of b-galactosidase with a 200 kV cryoARM electron microscope [Escherichia coli K-12],6X1Q_C 1.8 Angstrom resolution structure of b-galactosidase with a 200 kV cryoARM electron microscope [Escherichia coli K-12],6X1Q_D 1.8 Angstrom resolution structure of b-galactosidase with a 200 kV cryoARM electron microscope [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P23989 4.43e-29 66 427 124 486
Beta-galactosidase OS=Streptococcus thermophilus OX=1308 GN=lacZ PE=3 SV=1
O52847 6.01e-23 65 426 136 508
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
A5F5U6 3.45e-22 69 427 124 487
Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lacZ PE=3 SV=2
Q9K9C6 8.22e-22 66 427 124 488
Beta-galactosidase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lacZ PE=3 SV=1
Q48727 8.47e-20 76 428 122 460
Beta-galactosidase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=lacZ PE=3 SV=3

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000520 0.998568 0.000324 0.000207 0.000200 0.000182

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003556_01581.