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CAZyme Information: MGYG000003565_01299
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA3388 sp004551865 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; P3; UBA3388; UBA3388 sp004551865 | |||||||||||
| CAZyme ID | MGYG000003565_01299 | |||||||||||
| CAZy Family | GH171 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 34470; End: 35702 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH171 | 63 | 407 | 1.2e-115 | 0.9971830985915493 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam07075 | DUF1343 | 1.22e-174 | 64 | 407 | 1 | 362 | Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown. |
| COG3876 | YbbC | 6.26e-90 | 47 | 407 | 29 | 409 | Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown]. |
| cd06309 | PBP1_galactofuranose_YtfQ-like | 0.003 | 100 | 226 | 9 | 120 | periplasmic binding domain of ABC-type galactofuranose YtfQ-like transport systems. Periplasmic binding domain of ABC-type YtfQ-like transport systems. The YtfQ protein from Escherichia coli is up-regulated under glucose-limited conditions and shares homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their ligand specificity is not determined experimentally. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AVR45731.1 | 8.80e-149 | 2 | 408 | 11 | 413 |
| ARS35920.1 | 3.85e-145 | 47 | 407 | 45 | 399 |
| AXG72446.1 | 1.23e-144 | 42 | 408 | 54 | 426 |
| AGA78698.1 | 1.02e-143 | 39 | 407 | 40 | 406 |
| QYA25687.1 | 2.43e-143 | 2 | 408 | 11 | 412 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4JJA_A | 1.17e-114 | 42 | 408 | 4 | 369 | Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343] |
| 4K05_A | 1.29e-52 | 58 | 407 | 28 | 398 | Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P40407 | 1.15e-82 | 51 | 407 | 45 | 414 | Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.522756 | 0.240505 | 0.235998 | 0.000229 | 0.000181 | 0.000331 |