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CAZyme Information: MGYG000003566_01216

You are here: Home > Sequence: MGYG000003566_01216

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species F082 sp900769945
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; F082; F082; F082 sp900769945
CAZyme ID MGYG000003566_01216
CAZy Family GH33
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
842 MGYG000003566_24|CGC1 92272.11 4.249
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003566 1986649 MAG Fiji Oceania
Gene Location Start: 36133;  End: 38661  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003566_01216.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH33 404 744 2.2e-72 0.9766081871345029

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd15482 Sialidase_non-viral 9.23e-91 405 745 1 339
Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.
pfam13088 BNR_2 5.58e-18 448 725 17 280
BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases.
COG4409 NanH 9.36e-14 405 746 261 659
Neuraminidase (sialidase) [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis].
pfam14873 BNR_assoc_N 2.37e-11 266 382 15 145
N-terminal domain of BNR-repeat neuraminidase. This domain is usually found at the N-terminus of the BNR-repeat neuraminidase protein family.
pfam13385 Laminin_G_3 9.17e-11 27 197 1 151
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACM91104.1 0.0 72 842 2 773
QUT75110.1 1.17e-229 20 809 35 812
AHF12313.1 1.34e-177 122 778 1 648
QCX54140.1 1.13e-162 252 755 29 527
SCM56345.1 2.29e-155 253 750 35 529

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6MYV_A 7.03e-37 306 728 50 504
Sialidase26co-crystallized with DANA-Gc [bacterium],6MYV_B Sialidase26 co-crystallized with DANA-Gc [bacterium],6MYV_C Sialidase26 co-crystallized with DANA-Gc [bacterium],6MYV_D Sialidase26 co-crystallized with DANA-Gc [bacterium]
6MRV_A 9.93e-37 306 728 71 525
Sialidase26co-crystallized with DANA [bacterium],6MRV_B Sialidase26 co-crystallized with DANA [bacterium],6MRX_A Sialidase26 apo [bacterium],6MRX_B Sialidase26 apo [bacterium],6MRX_C Sialidase26 apo [bacterium],6MRX_D Sialidase26 apo [bacterium]
1EUR_A 3.00e-36 417 749 24 359
Sialidase[Micromonospora viridifaciens],1EUS_A Sialidase Complexed With 2-Deoxy-2,3-Dehydro-N- Acetylneuraminic Acid [Micromonospora viridifaciens]
6MNJ_A 4.35e-35 350 728 135 521
Hadzamicrobial sialidase Hz136 [Alistipes],6MNJ_B Hadza microbial sialidase Hz136 [Alistipes]
1W8N_A 7.49e-35 417 749 20 355
Contributionof the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora viridifaciens. [Micromonospora viridifaciens],1W8O_A Contribution of the Active Site Aspartic Acid to Catalysis in the Bacterial Neuraminidase from Micromonospora viridifaciens [Micromonospora viridifaciens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q02834 4.53e-34 392 749 42 401
Sialidase OS=Micromonospora viridifaciens OX=1881 GN=nedA PE=1 SV=1
P31206 1.76e-33 349 728 136 526
Sialidase OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=nanH PE=3 SV=2
P29767 3.27e-25 407 749 384 826
Sialidase OS=Clostridium septicum OX=1504 PE=3 SV=1
P15698 8.28e-20 405 747 39 398
Sialidase OS=Paeniclostridium sordellii OX=1505 PE=1 SV=1
P10481 9.03e-19 413 708 31 336
Sialidase OS=Clostridium perfringens OX=1502 GN=nanH PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000269 0.999103 0.000162 0.000159 0.000148 0.000140

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003566_01216.