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CAZyme Information: MGYG000003572_00391

You are here: Home > Sequence: MGYG000003572_00391

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900770025
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900770025
CAZyme ID MGYG000003572_00391
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
801 MGYG000003572_20|CGC1 85449.35 4.8829
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003572 2050564 MAG Fiji Oceania
Gene Location Start: 39422;  End: 41827  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003572_00391.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 478 648 2.2e-39 0.8316831683168316

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 4.86e-50 383 763 17 345
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 6.70e-27 483 649 17 190
Amb_all domain.
pfam00544 Pec_lyase_C 1.02e-14 459 645 8 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD40816.1 1.10e-288 215 801 2 588
QCP73706.1 1.10e-288 215 801 2 588
QUT73893.1 5.84e-220 284 801 25 542
QOR20273.1 1.24e-207 276 793 44 551
CBW15186.1 2.08e-207 276 793 59 566

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3VMV_A 2.18e-29 433 701 33 310
Crystalstructure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5]
1AIR_A 3.70e-18 489 761 94 342
ChainA, PECTATE LYASE C [Dickeya chrysanthemi],1O88_A Chain A, Pectate Lyase C [Dickeya chrysanthemi],1O8D_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8E_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8F_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8G_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8H_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8I_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8J_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8K_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8L_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8M_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1PLU_A Chain A, Protein (pectate Lyase C) [Dickeya chrysanthemi],2PEC_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi]
2EWE_A 8.94e-18 489 761 94 342
ChainA, Pectate lyase C [Dickeya chrysanthemi]
1VBL_A 3.96e-17 483 645 133 330
Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
3ZSC_A 2.04e-15 485 634 71 225
Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B1B6T1 8.08e-27 425 653 62 280
Pectate trisaccharide-lyase OS=Bacillus sp. OX=1409 GN=pel PE=1 SV=1
Q65DC2 8.08e-27 425 653 62 280
Pectate trisaccharide-lyase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=BLi04129 PE=3 SV=1
Q8GCB2 8.08e-27 425 653 62 280
Pectate trisaccharide-lyase OS=Bacillus licheniformis OX=1402 GN=pelA PE=1 SV=1
Q5AVN4 4.41e-18 483 658 99 277
Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1
P11073 2.60e-17 489 761 116 364
Pectate lyase C OS=Dickeya chrysanthemi OX=556 GN=pelC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000282 0.999086 0.000169 0.000168 0.000145 0.000137

TMHMM  Annotations      download full data without filtering help

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