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CAZyme Information: MGYG000003572_01104

You are here: Home > Sequence: MGYG000003572_01104

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900770025
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900770025
CAZyme ID MGYG000003572_01104
CAZy Family GT9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
359 MGYG000003572_61|CGC1 41282.18 9.8841
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003572 2050564 MAG Fiji Oceania
Gene Location Start: 8716;  End: 9795  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003572_01104.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT9 74 323 4.7e-33 0.9466666666666667

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd03789 GT9_LPS_heptosyltransferase 2.67e-46 5 343 1 275
lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
COG0859 RfaF 6.30e-34 1 351 1 334
ADP-heptose:LPS heptosyltransferase [Cell wall/membrane/envelope biogenesis].
pfam01075 Glyco_transf_9 1.65e-10 75 325 4 238
Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core.
PRK10422 PRK10422 1.29e-04 6 289 8 291
lipopolysaccharide core biosynthesis protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADE81510.1 7.80e-172 1 347 1 348
QVJ79708.1 7.80e-172 1 347 1 348
AGH14060.1 9.96e-168 1 347 1 348
ALO49713.1 2.24e-157 1 350 1 350
BCS85074.1 2.51e-156 1 350 1 350

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999515 0.000500 0.000017 0.000001 0.000001 0.000001

TMHMM  Annotations      download full data without filtering help

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