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CAZyme Information: MGYG000003572_01395

You are here: Home > Sequence: MGYG000003572_01395

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900770025
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900770025
CAZyme ID MGYG000003572_01395
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1347 142475.39 4.7274
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003572 2050564 MAG Fiji Oceania
Gene Location Start: 4207;  End: 8250  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003572_01395.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 77 254 1e-48 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4625 COG4625 3.38e-08 834 1092 1 228
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown].
PRK15319 PRK15319 9.68e-07 606 1050 621 1062
fibronectin-binding autotransporter adhesin ShdA.
COG3866 PelB 2.99e-06 10 310 12 323
Pectate lyase [Carbohydrate transport and metabolism].
cd00063 FN3 3.31e-06 433 521 3 93
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
pfam18884 TSP3_bac 1.99e-05 381 401 1 21
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEV97716.1 5.15e-287 22 1093 27 1105
QCD38445.1 1.74e-140 13 553 14 598
QCP72135.1 3.02e-135 13 553 14 598
QKD53272.1 3.04e-134 11 422 5 412
CCT64558.1 1.15e-133 11 422 5 412

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DPF0 3.80e-120 11 426 7 418
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B8NQQ7 1.91e-119 27 422 21 413
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
B0XMA2 2.74e-119 11 426 7 418
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 3.81e-119 11 426 7 418
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
Q2UB83 9.93e-118 27 422 21 413
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.254980 0.711317 0.011286 0.019337 0.002469 0.000576

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003572_01395.