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CAZyme Information: MGYG000003577_01144

You are here: Home > Sequence: MGYG000003577_01144

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Anaeroplasma sp900770055
Lineage Bacteria; Firmicutes; Bacilli; Acholeplasmatales; Anaeroplasmataceae; Anaeroplasma; Anaeroplasma sp900770055
CAZyme ID MGYG000003577_01144
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1715 183858.36 4.4147
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003577 1902494 MAG Fiji Oceania
Gene Location Start: 15;  End: 5162  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003577_01144.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 874 1081 1.6e-42 0.8663366336633663

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 3.19e-21 885 1079 15 186
Amb_all domain.
COG3866 PelB 3.05e-19 882 1085 97 279
Pectate lyase [Carbohydrate transport and metabolism].
pfam00544 Pec_lyase_C 3.06e-15 964 1079 89 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.
NF033761 gliding_GltJ 1.62e-07 3 72 417 486
adventurous gliding motility protein GltJ. Adventurous gliding motility protein GltJ, also known as AgmX, occurs in delta-proteobacteria such as Myxococcus xanthus.
NF033761 gliding_GltJ 1.36e-06 2 66 433 497
adventurous gliding motility protein GltJ. Adventurous gliding motility protein GltJ, also known as AgmX, occurs in delta-proteobacteria such as Myxococcus xanthus.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACR71161.1 1.57e-226 654 1291 47 686
ADU23076.1 1.75e-139 648 1196 757 1251
CDR31241.1 1.26e-110 702 1486 381 1119
BBF42492.1 3.99e-101 652 1176 40 510
QEH68115.1 2.53e-58 640 1171 28 478

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3VMV_A 1.54e-18 844 1095 50 262
Crystalstructure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5]
2QX3_A 2.18e-12 916 1094 78 261
Structureof pectate lyase II from Xanthomonas campestris pv. campestris str. ATCC 33913 [Xanthomonas campestris pv. campestris],2QX3_B Structure of pectate lyase II from Xanthomonas campestris pv. campestris str. ATCC 33913 [Xanthomonas campestris pv. campestris]
1AIR_A 3.59e-12 989 1092 166 270
ChainA, PECTATE LYASE C [Dickeya chrysanthemi],1O88_A Chain A, Pectate Lyase C [Dickeya chrysanthemi],1O8D_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8E_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8F_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8G_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8H_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8I_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8J_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8K_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8L_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8M_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1PLU_A Chain A, Protein (pectate Lyase C) [Dickeya chrysanthemi],2PEC_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi]
2EWE_A 8.52e-12 989 1092 166 270
ChainA, Pectate lyase C [Dickeya chrysanthemi]
2QXZ_A 9.29e-12 916 1094 78 261
ChainA, pectate lyase II [Xanthomonas campestris pv. campestris],2QXZ_B Chain B, pectate lyase II [Xanthomonas campestris pv. campestris]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P04959 5.58e-12 989 1092 187 292
Pectate lyase B OS=Dickeya chrysanthemi OX=556 GN=pelB PE=3 SV=1
P11073 2.33e-11 989 1092 188 292
Pectate lyase C OS=Dickeya chrysanthemi OX=556 GN=pelC PE=1 SV=1
P0C1C3 5.46e-11 946 1092 146 291
Pectate lyase 3 OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=pel3 PE=3 SV=1
Q6CZT2 5.46e-11 946 1092 146 291
Pectate lyase 3 OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=pel3 PE=3 SV=1
P0C1C2 5.46e-11 946 1092 146 291
Pectate lyase 3 OS=Pectobacterium carotovorum OX=554 GN=pel3 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000031 0.000014 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003577_01144.