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CAZyme Information: MGYG000003583_00604
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ruminococcus_C sp900770195 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; Ruminococcus_C sp900770195 | |||||||||||
| CAZyme ID | MGYG000003583_00604 | |||||||||||
| CAZy Family | CBM4 | |||||||||||
| CAZyme Description | Cellulose 1,4-beta-cellobiosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 25315; End: 28452 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH9 | 365 | 911 | 1.4e-102 | 0.992822966507177 |
| CBM4 | 45 | 143 | 9.8e-19 | 0.7222222222222222 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00759 | Glyco_hydro_9 | 6.17e-63 | 368 | 909 | 2 | 372 | Glycosyl hydrolase family 9. |
| cd02850 | E_set_Cellulase_N | 7.63e-23 | 272 | 360 | 2 | 86 | N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. |
| pfam02927 | CelD_N | 4.87e-20 | 272 | 355 | 3 | 83 | Cellulase N-terminal ig-like domain. |
| PLN00119 | PLN00119 | 8.67e-09 | 590 | 863 | 195 | 456 | endoglucanase |
| PLN02345 | PLN02345 | 2.91e-06 | 593 | 856 | 144 | 403 | endoglucanase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBL17684.1 | 2.50e-256 | 1 | 1011 | 1 | 932 |
| BAH56283.1 | 1.57e-229 | 44 | 915 | 174 | 1007 |
| ADU21576.1 | 4.03e-208 | 46 | 913 | 34 | 798 |
| CAS03458.1 | 2.05e-189 | 46 | 918 | 36 | 906 |
| AAR01216.1 | 2.57e-189 | 46 | 918 | 32 | 902 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1UT9_A | 2.63e-133 | 269 | 915 | 4 | 605 | ChainA, CELLULOSE 1,4-BETA-CELLOBIOSIDASE [Acetivibrio thermocellus] |
| 1RQ5_A | 7.48e-133 | 269 | 917 | 4 | 607 | ChainA, Cellobiohydrolase [Acetivibrio thermocellus] |
| 6DHT_A | 3.95e-48 | 272 | 915 | 18 | 565 | Bacteroidesovatus GH9 Bacova_02649 [Bacteroides ovatus ATCC 8483] |
| 3X17_A | 3.98e-46 | 274 | 912 | 20 | 554 | Crystalstructure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium],3X17_B Crystal structure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium] |
| 4CJ0_A | 1.07e-45 | 272 | 1002 | 30 | 587 | ChainA, ENDOGLUCANASE D [Acetivibrio thermocellus],4CJ1_A Chain A, ENDOGLUCANASE D [Acetivibrio thermocellus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A3DCH1 | 2.20e-153 | 43 | 999 | 40 | 856 | Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celK PE=3 SV=1 |
| P0C2S1 | 3.08e-153 | 43 | 999 | 40 | 856 | Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus OX=1515 GN=celK PE=1 SV=1 |
| Q05156 | 1.14e-108 | 203 | 917 | 116 | 745 | Cellulase 1 OS=Streptomyces reticuli OX=1926 GN=cel1 PE=1 SV=1 |
| P10476 | 3.43e-101 | 274 | 918 | 39 | 602 | Endoglucanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=celA PE=3 SV=2 |
| P14090 | 3.82e-100 | 215 | 917 | 297 | 910 | Endoglucanase C OS=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) OX=590998 GN=cenC PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000425 | 0.998745 | 0.000169 | 0.000295 | 0.000195 | 0.000165 |