logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003595_00704

You are here: Home > Sequence: MGYG000003595_00704

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species HGM11525 sp900770405
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; HGM11525; HGM11525 sp900770405
CAZyme ID MGYG000003595_00704
CAZy Family CBM67
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
683 MGYG000003595_127|CGC1 77021.43 5.5187
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003595 2475226 MAG Fiji Oceania
Gene Location Start: 4631;  End: 6682  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003595_00704.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 208 679 6.4e-75 0.9543650793650794
CBM67 11 139 1.9e-17 0.7159090909090909

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 9.84e-17 310 627 10 338
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNK59208.1 4.47e-116 16 681 17 743
QTH43327.1 9.11e-113 17 682 26 770
ALS29952.1 5.55e-107 11 682 14 760
BBH24613.1 3.08e-104 12 682 21 774
BBI31976.1 3.23e-103 16 673 25 760

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2OKX_A 1.62e-30 208 679 440 928
Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000054 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003595_00704.