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CAZyme Information: MGYG000003599_00761
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; | |||||||||||
| CAZyme ID | MGYG000003599_00761 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 936; End: 2372 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 201 | 457 | 1.6e-41 | 0.7446153846153846 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.84e-18 | 132 | 419 | 75 | 425 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 5.32e-06 | 222 | 421 | 77 | 274 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03003 | PLN03003 | 0.001 | 207 | 305 | 113 | 215 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBK63844.1 | 3.19e-123 | 40 | 476 | 16 | 478 |
| AFL77441.1 | 7.70e-123 | 40 | 476 | 33 | 495 |
| AFL77442.1 | 5.03e-119 | 34 | 476 | 286 | 756 |
| QQA09746.1 | 3.07e-113 | 5 | 476 | 4 | 505 |
| QQT79215.1 | 3.07e-113 | 5 | 476 | 4 | 505 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 3.59e-09 | 227 | 348 | 197 | 320 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 6NZS_A | 7.17e-08 | 91 | 390 | 91 | 482 | DextranaseAoDex KQ11 [Pseudarthrobacter oxydans] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P70744 | 9.45e-07 | 22 | 359 | 62 | 488 | Dextranase OS=Arthrobacter globiformis OX=1665 PE=3 SV=1 |
| P39652 | 1.65e-06 | 22 | 359 | 62 | 488 | Dextranase OS=Arthrobacter sp. (strain CB-8) OX=74565 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000260 | 0.999116 | 0.000190 | 0.000158 | 0.000146 | 0.000133 |