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CAZyme Information: MGYG000003627_01378

You are here: Home > Sequence: MGYG000003627_01378

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA1732;
CAZyme ID MGYG000003627_01378
CAZy Family GH9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
851 95369.39 6.5135
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003627 1872155 MAG Fiji Oceania
Gene Location Start: 163;  End: 2718  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003627_01378.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH9 400 831 1e-31 0.9090909090909091

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02850 E_set_Cellulase_N 2.58e-19 278 367 1 86
N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others.
pfam00759 Glyco_hydro_9 8.68e-13 443 646 49 235
Glycosyl hydrolase family 9.
pfam02927 CelD_N 9.42e-08 277 361 1 82
Cellulase N-terminal ig-like domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGH13480.1 1.50e-23 760 845 3 89
AHM62091.1 1.81e-12 770 830 3 63
QRX63715.1 6.51e-10 279 830 25 529
QNR87147.1 3.66e-09 274 851 22 583
QXU40321.1 4.84e-09 277 851 25 583

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000397 0.998895 0.000229 0.000159 0.000154 0.000139

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003627_01378.