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CAZyme Information: MGYG000003627_01523

You are here: Home > Sequence: MGYG000003627_01523

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA1732;
CAZyme ID MGYG000003627_01523
CAZy Family GH146
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
799 91220.53 7.153
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003627 1872155 MAG Fiji Oceania
Gene Location Start: 2240;  End: 4639  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003627_01523.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH146 43 550 2.1e-182 0.9940357852882704

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07944 Glyco_hydro_127 5.52e-157 42 549 1 501
Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533 COG3533 1.51e-108 33 562 4 508
Uncharacterized conserved protein, DUF1680 family [Function unknown].
pfam03663 Glyco_hydro_76 8.07e-05 233 356 164 287
Glycosyl hydrolase family 76. Family of alpha-1,6-mannanases.
cd04434 LanC_like 3.41e-04 98 296 2 240
Cyclases involved in the biosynthesis of lantibiotics, and similar proteins. LanC is the cyclase enzyme of the lanthionine synthetase. Lanthionine is a lantibiotic, a unique class of peptide antibiotics. They are ribosomally synthesized as a precursor peptide and then post-translationally modified to contain thioether cross-links called lanthionines (Lans) or methyllanthionines (MeLans), in addition to 2,3-didehydroalanine (Dha) and (Z)-2,3-didehydrobutyrine (Dhb). These unusual amino acids are introduced by the dehydration of serine and threonine residues, followed by thioether formation via addition of cysteine thiols, catalysed by LanB and LanC or LanM. LanC, the cyclase component, is a zinc metalloprotein, whose bound metal has been proposed to activate the thiol substrate for nucleophilic addition. A related domain is also present in LanM and other pro- and eukaryotic proteins with poorly characterized functions.
pfam16375 DUF4986 0.002 589 638 35 84
Domain of unknown function. This family around 150 residues locates in the C-terminal of some uncharacterized proteins in various Bacteroides and Bacillus species. The function of this family remains unknown.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIX60435.1 2.29e-180 2 793 3 783
AET59347.1 2.99e-176 26 784 2 743
QNR70044.1 4.66e-176 34 784 2 735
APB78465.1 6.58e-176 34 784 2 735
ALA44767.1 9.28e-176 34 784 2 735

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6YQH_AAA 1.85e-153 28 789 18 795
ChainAAA, Acetyl-CoA carboxylase, biotin carboxylase [Bacteroides thetaiotaomicron VPI-5482]
5OPJ_A 9.55e-150 28 789 18 795
Beta-L-arabinofuranosidase[Bacteroides thetaiotaomicron]
5MQO_A 3.30e-16 239 549 255 605
Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.007424 0.605114 0.380854 0.004597 0.001183 0.000798

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003627_01523.