dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000003634_00637

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Basic Information help

Species

SFVR01 sp900771035

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Paludibacteraceae; SFVR01; SFVR01 sp900771035

CAZyme ID

MGYG000003634_00637

CAZy Family

GT51

CAZyme Description

Monofunctional biosynthetic peptidoglycan transglycosylase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
438		50101.16	10.0752

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003634	1732908	MAG	Fiji	Oceania

Gene Location

Start: 9502; End: 10818 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000003634_00637.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GT51	264	427	6.5e-48	0.9265536723163842

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK00056	mtgA	5.65e-102	212	430	6	226	monofunctional biosynthetic peptidoglycan transglycosylase; Provisional
TIGR02070	mono_pep_trsgly	8.09e-73	212	431	1	222	monofunctional biosynthetic peptidoglycan transglycosylase. This family is one of the transglycosylases involved in the late stages of peptidoglycan biosynthesis. Members tend to be small, about 240 amino acids in length, and consist almost entirely of a domain described by pfam00912 for transglycosylases. Species with this protein will have several other transglycosylases as well. All species with this protein are Proteobacteria that produce murein (peptidoglycan). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
COG0744	MrcB	4.95e-60	203	427	1	240	Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis].
pfam00912	Transgly	2.22e-57	258	427	6	176	Transglycosylase. The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains.
cd02022	DPCK	2.19e-34	14	174	12	177	Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ADQ78322.1	8.13e-71	207	432	21	248
QQY44710.1	1.34e-69	229	436	18	225
QEW36541.1	1.52e-69	229	436	20	227
ALK85569.1	1.52e-69	229	436	20	227
ABR40970.1	1.52e-69	229	436	20	227

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2OQO_A	1.68e-22	264	419	19	176	Crystalstructure of a peptidoglycan glycosyltransferase from a class A PBP: insight into bacterial cell wall synthesis [Aquifex aeolicus VF5],3D3H_A Crystal structure of a complex of the peptidoglycan glycosyltransferase domain from Aquifex aeolicus and neryl moenomycin A [Aquifex aeolicus],3NB7_A Crystal structure of Aquifex Aeolicus Peptidoglycan Glycosyltransferase in complex with Decarboxylated Neryl Moenomycin [Aquifex aeolicus]
3NB6_A	3.17e-22	264	419	19	176	Crystalstructure of Aquifex aeolicus peptidoglycan glycosyltransferase in complex with Methylphosphoryl Neryl Moenomycin [Aquifex aeolicus]
1UF9_A	1.67e-18	4	184	11	190	Crystalstructure of TT1252 from Thermus thermophilus [Thermus thermophilus],1UF9_B Crystal structure of TT1252 from Thermus thermophilus [Thermus thermophilus],1UF9_C Crystal structure of TT1252 from Thermus thermophilus [Thermus thermophilus]
7U4H_A	8.58e-17	253	409	28	183	ChainA, Penicillin-binding protein 1A (Pbp1a) [Chlamydia trachomatis D/UW-3/CX],7U4H_B Chain B, Penicillin-binding protein 1A (Pbp1a) [Chlamydia trachomatis D/UW-3/CX]
4I1U_A	2.77e-16	1	171	9	184	Apocrystal structure of a dephospho-CoA kinase from Burkholderia vietnamiensis [Burkholderia vietnamiensis G4],4I1U_B Apo crystal structure of a dephospho-CoA kinase from Burkholderia vietnamiensis [Burkholderia vietnamiensis G4],4I1V_A Crystal structure of a dephospho-CoA kinase from Burkholderia vietnamiensis bound to ADP [Burkholderia vietnamiensis G4],4I1V_B Crystal structure of a dephospho-CoA kinase from Burkholderia vietnamiensis bound to ADP [Burkholderia vietnamiensis G4]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q3V815	6.92e-61	209	434	2	226	Biosynthetic peptidoglycan transglycosylase OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=mtgA PE=3 SV=1
Q3V7G2	6.92e-61	209	434	2	226	Biosynthetic peptidoglycan transglycosylase OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=mtgA PE=3 SV=1
Q8A8H2	7.59e-60	229	434	25	230	Biosynthetic peptidoglycan transglycosylase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=mtgA PE=3 SV=1
Q3V7R3	2.93e-56	212	424	6	218	Biosynthetic peptidoglycan transglycosylase OS=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100) OX=264462 GN=mtgA PE=3 SV=1
Q9ABA6	7.81e-53	211	423	6	212	Biosynthetic peptidoglycan transglycosylase OS=Caulobacter vibrioides (strain ATCC 19089 / CB15) OX=190650 GN=mtgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000060	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM Annotations download full data without filtering help

start	end
222	244