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CAZyme Information: MGYG000003636_01425

You are here: Home > Sequence: MGYG000003636_01425

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1724 sp900771165
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; UBA1407; UBA1407; UBA1724; UBA1724 sp900771165
CAZyme ID MGYG000003636_01425
CAZy Family CBM67
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
706 80759.84 6.4984
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003636 2261924 MAG Fiji Oceania
Gene Location Start: 105;  End: 2225  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003636_01425.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 264 701 6.6e-77 0.8551587301587301
CBM67 19 199 3e-17 0.9261363636363636

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 7.29e-07 378 697 10 334
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM45773.1 6.95e-189 13 701 10 685
QDK78124.1 5.59e-111 2 700 19 715
QMW03426.1 2.03e-109 2 700 19 710
QJD77661.1 7.88e-108 10 700 24 708
ADB40230.1 8.26e-108 2 700 18 710

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2OKX_A 1.38e-25 262 699 435 872
Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000041 0.000010 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003636_01425.