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CAZyme Information: MGYG000003639_00659

You are here: Home > Sequence: MGYG000003639_00659

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; UBA1067;
CAZyme ID MGYG000003639_00659
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
502 MGYG000003639_285|CGC1 57803.64 8.5034
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003639 2206539 MAG Fiji Oceania
Gene Location Start: 2876;  End: 4384  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003639_00659.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 234 454 3.5e-30 0.6666666666666666

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 7.56e-23 240 453 63 263
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 2.80e-20 51 452 11 307
Glycosyl hydrolase family 10.
COG3693 XynA 7.66e-12 107 459 65 343
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGA28189.1 3.82e-175 1 502 28 504
QQZ02681.1 7.07e-166 1 492 25 485
AVM47074.1 4.14e-161 2 492 19 486
AHF92621.1 5.08e-158 1 492 18 481
AWI10666.1 2.73e-152 1 502 1 480

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000042 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003639_00659.