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CAZyme Information: MGYG000003642_00304

You are here: Home > Sequence: MGYG000003642_00304

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RUG572 sp900771305
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900771305
CAZyme ID MGYG000003642_00304
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1837 200408.51 6.5509
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003642 3810265 MAG Fiji Oceania
Gene Location Start: 107;  End: 5620  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003642_00304.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 518 1341 5.8e-175 0.9235436893203883
GH5 205 479 2e-36 0.7418181818181818

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 3.13e-117 522 1193 2 864
alpha-L-rhamnosidase.
pfam00150 Cellulase 2.61e-18 208 470 30 271
Cellulase (glycosyl hydrolase family 5).
pfam13385 Laminin_G_3 6.21e-17 1509 1677 5 150
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
COG2730 BglC 3.43e-09 207 486 78 378
Aryl-phospho-beta-D-glucosidase BglC, GH1 family [Carbohydrate transport and metabolism].
smart00560 LamGL 3.49e-08 1525 1675 2 133
LamG-like jellyroll fold domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ARK11122.1 4.54e-138 512 1342 21 898
AEE51369.1 1.10e-133 520 1350 35 904
BAU56202.1 9.31e-131 520 1342 50 920
ACU03164.1 8.71e-130 532 1356 51 909
BBO30824.1 1.25e-129 522 1335 55 921

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 7.34e-74 682 1355 425 1092
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A 1.93e-61 678 1335 382 1035
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 4.48e-61 678 1335 382 1035
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]
3NCO_A 9.39e-10 208 485 47 306
Crystalstructure of FnCel5A from F. nodosum Rt17-B1 [Fervidobacterium nodosum Rt17-B1],3NCO_B Crystal structure of FnCel5A from F. nodosum Rt17-B1 [Fervidobacterium nodosum Rt17-B1]
3RJX_A 1.67e-09 208 485 47 306
CrystalStructure of Hyperthermophilic Endo-Beta-1,4-glucanase [Fervidobacterium nodosum Rt17-B1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 3.58e-79 514 1231 28 741
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.017143 0.436457 0.542175 0.002317 0.001012 0.000880

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003642_00304.