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CAZyme Information: MGYG000003642_01338

You are here: Home > Sequence: MGYG000003642_01338

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RUG572 sp900771305
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900771305
CAZyme ID MGYG000003642_01338
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
630 69387.78 6.8224
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003642 3810265 MAG Fiji Oceania
Gene Location Start: 7119;  End: 9011  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003642_01338.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 63 238 1.8e-29 0.4965197215777262

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01229 Glyco_hydro_39 4.21e-08 67 231 74 270
Glycosyl hydrolases family 39.
COG3664 XynB 1.89e-04 99 248 117 266
Beta-xylosidase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDU57372.1 6.46e-118 19 626 29 627
AVM44885.1 5.01e-76 1 627 9 614
AVM44901.1 2.82e-50 19 535 26 546
AHF90941.1 2.30e-38 19 536 233 765
SDS89296.1 1.07e-29 19 237 305 530

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4EKJ_A 4.76e-09 35 196 46 231
ChainA, Beta-xylosidase [Caulobacter vibrioides]
4M29_A 4.76e-09 35 196 46 231
Structureof a GH39 Beta-xylosidase from Caulobacter crescentus [Caulobacter vibrioides CB15]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000016 0.000022 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003642_01338.