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CAZyme Information: MGYG000003642_01539

You are here: Home > Sequence: MGYG000003642_01539

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RUG572 sp900771305
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900771305
CAZyme ID MGYG000003642_01539
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
912 101424.85 7.5209
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003642 3810265 MAG Fiji Oceania
Gene Location Start: 13938;  End: 16676  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003642_01539.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 28 608 2.9e-118 0.6092233009708737

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 2.77e-93 36 682 4 869
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNN24136.1 3.27e-196 23 909 28 981
BBD45426.1 5.21e-183 32 909 53 1001
QGY42609.1 5.59e-181 32 910 53 1002
ARK11122.1 2.88e-115 30 909 32 953
BBO30824.1 4.15e-108 28 912 50 987

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 1.44e-62 200 910 420 1139
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A 5.46e-61 40 852 43 1063
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 1.32e-60 40 852 43 1063
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 9.53e-52 28 719 30 749
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000249 0.999141 0.000175 0.000152 0.000133 0.000126

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003642_01539.