CAZyme Information: MGYG000003642_01547

Basic Information

• Species: RUG572 sp900771305
• Lineage: Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900771305
• CAZyme ID: MGYG000003642_01547
• CAZy Family: GH50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
678		77496.03	7.7109

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003642	3810265	MAG	Fiji	Oceania

• Gene Location: Start: 4668; End: 6704 Strand: -

Full Sequence      

MLQSFGLLRCSLLKEVVYRRPSFYAMQHVFSYFDEDVHPVGLSKQTVNGKELTVAKFERQ
SQPVYVLWFSGERPGDTLAYERGDVVFDMLGFRDAVWVDLLTGKVCRFPAANIVRTGKQT
VVKGLPLWDSPILLAPNNQIPRRTEWAEMKPAEIVDALYRPHQEMRGWVGKKLPIKMTVT
NEPWAKMATKDFLPCFDKFGQFKWRDWPGKTHSDEELKSGMAAEEADLAANPGPADRDQF
GGWTKGPKQAATGRFYPKKLDGKWWLVDPEGNLFWSWGPVRVTPSSALTPLNGNPRTPKC
GGAMPDRDCLFTDLPKKGEALAQFYDTYDALLLPFYLKRDETRRFDFSAANLYRKYGEQW
FEKYSDSCHRRLRSWGCNTIANSSDLKICLQDRTPYAERVEVASRPIAGSWGSWFKFRDP
FDPTFRTACLSALAEHGREAHDPWCIGFFIDNEIQWGSKHEDLARWTLWSPDDQPAKVEF
VKRLAAKGIVWDGNIDKIPAEELRAFTDVIVEEYFKRTREAVKEYDKGLLYLGCRFAGSA
RPWSVKACARYCDVVSYNIYTDSILDWRLPEKLDAPVLIGEFHFGAHDRGLFGSGLVNAG
SQEGRAAALKAYVESALRNPQVVGVHWHQFSDQATSGRFDGEYFQVGWTDICDRPYPETV
KALREVGYPLYETRINAR

Enzyme Prediction     

No EC number prediction in MGYG000003642_01547.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH50	185	671	3.2e-120	0.7886676875957122

CDD Domains     

MGYG000003642_01547 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AXP07840.1	3.58e-192	147	678	177	722
AGY53973.1	4.61e-186	184	674	189	684
ASV75458.1	1.27e-140	183	674	184	681
AXP07838.1	8.90e-139	191	674	218	709
QNN24957.1	2.65e-133	182	674	688	1210

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4BQ2_A	2.86e-75	197	678	205	750	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A	7.63e-75	197	678	205	750	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
5Z6P_A	1.65e-69	197	674	224	762	Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
6XJ9_A	4.92e-65	197	674	224	762	Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P48840	5.26e-71	197	674	433	952	Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839	3.80e-45	197	673	400	915	Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000035	0.000027	0.000001	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003642_01547.