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CAZyme Information: MGYG000003642_01980

You are here: Home > Sequence: MGYG000003642_01980

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RUG572 sp900771305
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900771305
CAZyme ID MGYG000003642_01980
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
830 92175.52 7.7142
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003642 3810265 MAG Fiji Oceania
Gene Location Start: 4829;  End: 7321  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003642_01980.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 21 558 1.2e-106 0.5764563106796117

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 1.51e-67 26 612 2 869
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNN24136.1 3.50e-176 2 829 7 981
BBD45426.1 1.38e-153 22 830 51 1002
QGY42609.1 1.19e-144 22 829 51 1001
AEE51369.1 8.58e-108 23 792 34 935
ARK11122.1 2.46e-107 14 829 23 953

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MQM_A 1.23e-66 20 774 31 1063
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 3.05e-66 20 774 31 1063
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]
6Q2F_A 4.51e-50 216 775 463 1105
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 3.25e-46 20 649 30 747
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000294 0.998982 0.000188 0.000177 0.000170 0.000165

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003642_01980.