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CAZyme Information: MGYG000003642_02040

You are here: Home > Sequence: MGYG000003642_02040

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RUG572 sp900771305
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900771305
CAZyme ID MGYG000003642_02040
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
672 75018.46 7.6592
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003642 3810265 MAG Fiji Oceania
Gene Location Start: 6926;  End: 8944  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003642_02040.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 128 354 4.3e-34 0.8021978021978022

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3934 COG3934 1.16e-14 46 558 6 511
Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AHF94684.1 1.01e-114 59 663 1 628
PVY35568.1 8.72e-114 38 638 2 611
AMJ67494.1 8.76e-114 34 618 21 617
AVM43652.1 3.03e-113 34 642 7 623
ANE45096.1 4.19e-109 39 662 9 641

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000370 0.998810 0.000283 0.000174 0.000169 0.000160

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003642_02040.