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CAZyme Information: MGYG000003642_02388

You are here: Home > Sequence: MGYG000003642_02388

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RUG572 sp900771305
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900771305
CAZyme ID MGYG000003642_02388
CAZy Family GH142
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
528 MGYG000003642_429|CGC1 59826.07 8.0377
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003642 3810265 MAG Fiji Oceania
Gene Location Start: 4707;  End: 6293  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003642_02388.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH142 28 520 4.4e-143 0.9937369519832986

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3408 GDB1 0.001 145 360 343 549
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QTN34408.1 2.55e-143 12 514 17 514
QIP13753.1 6.37e-142 4 520 10 527
QJD81405.1 2.11e-140 22 527 34 531
AKP53292.1 1.68e-136 16 523 28 541
BBD46516.1 1.31e-132 22 528 48 553

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MQS_A 2.03e-89 24 522 629 1101
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
5MQR_A 2.31e-84 24 522 629 1101
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
6M5A_A 6.81e-13 52 511 309 798
Crystalstructure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH9 4.70e-12 52 511 340 829
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.200265 0.747948 0.050550 0.000475 0.000355 0.000386

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003642_02388.