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CAZyme Information: MGYG000003642_02605

You are here: Home > Sequence: MGYG000003642_02605

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RUG572 sp900771305
Lineage Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900771305
CAZyme ID MGYG000003642_02605
CAZy Family GH27
CAZyme Description 3-dehydroquinate dehydratase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
917 101160.62 8.0418
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003642 3810265 MAG Fiji Oceania
Gene Location Start: 792;  End: 3545  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003642_02605.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH27 627 881 2.7e-64 0.9868995633187773

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd14792 GH27 2.05e-106 516 815 1 271
glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.
PLN02808 PLN02808 7.62e-72 514 895 30 377
alpha-galactosidase
PLN02692 PLN02692 1.89e-68 514 895 54 402
alpha-galactosidase
PLN02229 PLN02229 3.18e-60 512 884 59 404
alpha-galactosidase
pfam16499 Melibiase_2 7.64e-52 515 815 1 284
Alpha galactosidase A.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AHG92067.1 2.79e-146 291 902 79 682
QEH34490.1 1.28e-142 339 902 108 655
ANI88636.1 1.42e-140 420 901 30 492
AQT69427.1 2.10e-139 253 901 40 662
AYD47490.1 4.76e-138 420 901 30 492

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4NZJ_A 2.66e-70 428 848 12 419
Crystalstructure of a putative alpha-galactosidase (BF1418) from Bacteroides fragilis NCTC 9343 at 1.57 A resolution [Bacteroides fragilis NCTC 9343]
4OGZ_A 3.32e-70 428 848 12 419
Crystalstructure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution [Bacteroides fragilis NCTC 9343],4OGZ_B Crystal structure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution [Bacteroides fragilis NCTC 9343]
1UAS_A 3.67e-57 515 894 8 352
ChainA, alpha-galactosidase [Oryza sativa]
6F4C_B 8.99e-53 515 894 8 353
Nicotianabenthamiana alpha-galactosidase [Nicotiana benthamiana]
3A5V_A 4.23e-50 512 900 5 389
Crystalstructure of alpha-galactosidase I from Mortierella vinacea [Umbelopsis vinacea]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q55B10 2.52e-59 512 905 24 385
Probable alpha-galactosidase OS=Dictyostelium discoideum OX=44689 GN=melA PE=3 SV=1
P14749 3.34e-58 515 895 55 401
Alpha-galactosidase OS=Cyamopsis tetragonoloba OX=3832 PE=1 SV=1
Q8RX86 1.01e-56 508 895 32 385
Alpha-galactosidase 2 OS=Arabidopsis thaliana OX=3702 GN=AGAL2 PE=1 SV=1
Q9FT97 3.73e-56 514 895 52 400
Alpha-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=AGAL1 PE=2 SV=1
Q42656 4.22e-56 498 894 6 368
Alpha-galactosidase OS=Coffea arabica OX=13443 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.271139 0.502423 0.224755 0.000628 0.000365 0.000669

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003642_02605.