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CAZyme Information: MGYG000003642_02605
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | RUG572 sp900771305 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900771305 | |||||||||||
| CAZyme ID | MGYG000003642_02605 | |||||||||||
| CAZy Family | GH27 | |||||||||||
| CAZyme Description | 3-dehydroquinate dehydratase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 792; End: 3545 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH27 | 627 | 881 | 2.7e-64 | 0.9868995633187773 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd14792 | GH27 | 2.05e-106 | 516 | 815 | 1 | 271 | glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively. |
| PLN02808 | PLN02808 | 7.62e-72 | 514 | 895 | 30 | 377 | alpha-galactosidase |
| PLN02692 | PLN02692 | 1.89e-68 | 514 | 895 | 54 | 402 | alpha-galactosidase |
| PLN02229 | PLN02229 | 3.18e-60 | 512 | 884 | 59 | 404 | alpha-galactosidase |
| pfam16499 | Melibiase_2 | 7.64e-52 | 515 | 815 | 1 | 284 | Alpha galactosidase A. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AHG92067.1 | 2.79e-146 | 291 | 902 | 79 | 682 |
| QEH34490.1 | 1.28e-142 | 339 | 902 | 108 | 655 |
| ANI88636.1 | 1.42e-140 | 420 | 901 | 30 | 492 |
| AQT69427.1 | 2.10e-139 | 253 | 901 | 40 | 662 |
| AYD47490.1 | 4.76e-138 | 420 | 901 | 30 | 492 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4NZJ_A | 2.66e-70 | 428 | 848 | 12 | 419 | Crystalstructure of a putative alpha-galactosidase (BF1418) from Bacteroides fragilis NCTC 9343 at 1.57 A resolution [Bacteroides fragilis NCTC 9343] |
| 4OGZ_A | 3.32e-70 | 428 | 848 | 12 | 419 | Crystalstructure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution [Bacteroides fragilis NCTC 9343],4OGZ_B Crystal structure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution [Bacteroides fragilis NCTC 9343] |
| 1UAS_A | 3.67e-57 | 515 | 894 | 8 | 352 | ChainA, alpha-galactosidase [Oryza sativa] |
| 6F4C_B | 8.99e-53 | 515 | 894 | 8 | 353 | Nicotianabenthamiana alpha-galactosidase [Nicotiana benthamiana] |
| 3A5V_A | 4.23e-50 | 512 | 900 | 5 | 389 | Crystalstructure of alpha-galactosidase I from Mortierella vinacea [Umbelopsis vinacea] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q55B10 | 2.52e-59 | 512 | 905 | 24 | 385 | Probable alpha-galactosidase OS=Dictyostelium discoideum OX=44689 GN=melA PE=3 SV=1 |
| P14749 | 3.34e-58 | 515 | 895 | 55 | 401 | Alpha-galactosidase OS=Cyamopsis tetragonoloba OX=3832 PE=1 SV=1 |
| Q8RX86 | 1.01e-56 | 508 | 895 | 32 | 385 | Alpha-galactosidase 2 OS=Arabidopsis thaliana OX=3702 GN=AGAL2 PE=1 SV=1 |
| Q9FT97 | 3.73e-56 | 514 | 895 | 52 | 400 | Alpha-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=AGAL1 PE=2 SV=1 |
| Q42656 | 4.22e-56 | 498 | 894 | 6 | 368 | Alpha-galactosidase OS=Coffea arabica OX=13443 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.271139 | 0.502423 | 0.224755 | 0.000628 | 0.000365 | 0.000669 |