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CAZyme Information: MGYG000003642_02675
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | RUG572 sp900771305 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Verrucomicrobiota; Kiritimatiellae; RFP12; UBA1067; RUG572; RUG572 sp900771305 | |||||||||||
| CAZyme ID | MGYG000003642_02675 | |||||||||||
| CAZy Family | GT5 | |||||||||||
| CAZyme Description | Glycogen synthase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2249; End: 3787 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT5 | 14 | 498 | 6.9e-106 | 0.9957627118644068 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK00654 | glgA | 4.94e-103 | 14 | 503 | 2 | 466 | glycogen synthase GlgA. |
| cd03791 | GT5_Glycogen_synthase_DULL1-like | 6.20e-102 | 14 | 499 | 1 | 474 | Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| TIGR02095 | glgA | 3.12e-87 | 14 | 499 | 2 | 472 | glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides] |
| COG0297 | GlgA | 1.54e-80 | 14 | 501 | 2 | 479 | Glycogen synthase [Carbohydrate transport and metabolism]. |
| PLN02939 | PLN02939 | 5.63e-41 | 1 | 503 | 443 | 970 | transferase, transferring glycosyl groups |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AVM44236.1 | 6.75e-234 | 11 | 507 | 8 | 505 |
| QSH42549.1 | 2.55e-233 | 8 | 506 | 4 | 503 |
| AKJ63772.1 | 2.62e-229 | 8 | 509 | 7 | 508 |
| QBG47428.1 | 4.12e-227 | 5 | 511 | 23 | 529 |
| QTA85255.1 | 2.28e-223 | 6 | 511 | 4 | 508 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2QZS_A | 1.20e-40 | 39 | 500 | 15 | 476 | CrystalStructure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSb) [Escherichia coli],2R4T_A Crystal Structure of Wild-type E.coli GS in Complex with ADP and Glucose(wtGSc) [Escherichia coli],2R4U_A Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSd) [Escherichia coli],3GUH_A Crystal Structure of Wild-type E.coli GS in complex with ADP and DGM [Escherichia coli K-12] |
| 3D1J_A | 1.45e-40 | 39 | 500 | 15 | 476 | ChainA, Glycogen synthase [Escherichia coli] |
| 3COP_A | 8.15e-40 | 39 | 500 | 15 | 476 | ChainA, Glycogen synthase [Escherichia coli],3CX4_A Chain A, Glycogen synthase [Escherichia coli] |
| 6GNE_A | 1.81e-37 | 31 | 503 | 14 | 500 | Catalyticdomain of Starch Synthase IV from Arabidopsis thaliana bound to ADP and acarbose [Arabidopsis thaliana],6GNE_B Catalytic domain of Starch Synthase IV from Arabidopsis thaliana bound to ADP and acarbose [Arabidopsis thaliana] |
| 4HLN_A | 3.99e-25 | 144 | 460 | 269 | 588 | Structureof barley starch synthase I in complex with maltooligosaccharide [Hordeum vulgare] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q7NM37 | 5.15e-46 | 38 | 503 | 14 | 456 | Glycogen synthase OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=glgA PE=3 SV=1 |
| Q2RH55 | 8.90e-46 | 14 | 503 | 6 | 478 | Glycogen synthase OS=Moorella thermoacetica (strain ATCC 39073 / JCM 9320) OX=264732 GN=glgA PE=3 SV=1 |
| B1YK70 | 1.59e-45 | 39 | 497 | 15 | 475 | Glycogen synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / CIP 109462 / JCM 13490 / 255-15) OX=262543 GN=glgA PE=3 SV=1 |
| Q3A0B8 | 2.17e-44 | 38 | 499 | 14 | 477 | Glycogen synthase OS=Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=glgA PE=3 SV=1 |
| Q73MC7 | 4.68e-44 | 38 | 497 | 14 | 480 | Glycogen synthase OS=Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104) OX=243275 GN=glgA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000032 | 0.000007 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |