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CAZyme Information: MGYG000003644_00668

You are here: Home > Sequence: MGYG000003644_00668

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia;
CAZyme ID MGYG000003644_00668
CAZy Family CBM4
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
530 57699.35 4.0663
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003644 2073085 MAG Fiji Oceania
Gene Location Start: 93;  End: 1685  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003644_00668.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM4 210 343 1.6e-29 0.9841269841269841
CBM4 382 508 3.8e-26 0.9920634920634921
CBM4 71 193 2.3e-16 0.9920634920634921

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02018 CBM_4_9 2.17e-07 382 499 2 123
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.
pfam02018 CBM_4_9 1.61e-05 210 337 3 126
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.
pfam02018 CBM_4_9 1.48e-04 70 158 1 84
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCN29267.1 1.77e-194 3 530 679 1202
QAA34888.1 9.39e-152 1 530 700 1221
QQQ91210.1 1.20e-141 1 530 627 1153
ASU30685.1 1.20e-141 1 530 627 1153
ANU77877.1 1.20e-141 1 530 627 1153

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000064 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003644_00668.