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CAZyme Information: MGYG000003644_01732

You are here: Home > Sequence: MGYG000003644_01732

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia;
CAZyme ID MGYG000003644_01732
CAZy Family GH105
CAZyme Description Unsaturated rhamnogalacturonyl hydrolase YteR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
378 MGYG000003644_635|CGC1 44121.13 4.7429
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003644 2073085 MAG Fiji Oceania
Gene Location Start: 154;  End: 1290  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003644_01732.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 30 371 1.9e-118 0.9728915662650602

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4225 YesR 1.79e-98 32 373 31 356
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
pfam07470 Glyco_hydro_88 1.76e-87 35 372 27 341
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEN96572.1 4.09e-271 1 377 1 377
CBL09353.1 2.17e-263 1 372 1 372
VCV21981.1 1.25e-262 1 372 1 372
CBL12002.1 2.53e-262 1 372 1 372
SET55199.1 4.03e-223 1 376 1 375

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4WU0_A 4.70e-111 35 369 23 357
StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
1NC5_A 3.38e-71 35 370 39 364
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 1.42e-70 35 370 29 354
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34559 1.85e-70 35 370 39 364
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6 8.93e-43 146 369 1 227
Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7 8.93e-43 146 369 1 227
24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000079 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003644_01732.