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CAZyme Information: MGYG000003650_01360

You are here: Home > Sequence: MGYG000003650_01360

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1786 sp900771425
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; UBA1786; UBA1786 sp900771425
CAZyme ID MGYG000003650_01360
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
914 100938.7 5.2232
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003650 2572020 MAG Fiji Oceania
Gene Location Start: 5654;  End: 8398  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003650_01360.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13385 Laminin_G_3 7.25e-25 700 850 1 149
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
pfam14200 RicinB_lectin_2 3.22e-08 455 520 14 79
Ricin-type beta-trefoil lectin domain-like.
smart00060 FN3 3.94e-06 556 634 1 80
Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
COG3401 FN3 1.05e-04 491 644 182 339
Fibronectin type 3 domain [General function prediction only].
pfam14200 RicinB_lectin_2 2.29e-04 400 483 12 89
Ricin-type beta-trefoil lectin domain-like.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGB29926.1 3.87e-251 9 912 7 897
QIM09902.1 4.05e-221 58 914 29 873
QUT88791.1 1.27e-219 11 872 16 861
ALJ60208.1 2.52e-216 11 854 16 844
ASB47762.1 2.28e-215 19 847 23 830

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4QVS_A 1.22e-14 696 851 47 216
ChainA, S-layer domain-containing protein [Acetivibrio thermocellus ATCC 27405]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000188 0.999238 0.000153 0.000148 0.000138 0.000127

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003650_01360.