CAZyme Information: MGYG000003657_00003

Basic Information

• Species: Collinsella sp900552875
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900552875
• CAZyme ID: MGYG000003657_00003
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
699		76016.62	4.463

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003657	1938850	MAG	United States	North America

• Gene Location: Start: 1929; End: 4028 Strand: -

Full Sequence      

MRFDAPTGVTTIELYATSQKTGFRDEYINMVDAASCHALIDAVYEPTFEHLGDEFGKTIL
GFFTDEPGFMNEKGTTLDDASTSSFIGRGDLALPWSDELARRLYDALGENWLAKLHGLWT
REANGAQVRHAYMDLATQLYRSCFDEQIGDWCRAHGVMHIGHVIEDKSCHTRLGQGAGHY
FRAVAGQDMAGVDVVINQLAPGIDRGRYSYFHGAWNMEFFTYALAKLGSSAARLDPKKQG
RCMAEVFGAFGWHEGLREMKWIADHMLVRGINWFTPHAFSMAPFPDWDCPPHFYAHGNNP
QWPHFGQLMRYMNRTATLLSEGAAARPVAILYHADAEWAGNAMPVERVAAELTRAQIDFD
FVPAEAFEDEGRYEVSIADGMLAVNGCRYQAFVMPGASFIGAATAEEVRRMMAAGVTVLA
ADEVPGALYDADGAADLDGLTTTPLADVANALADAGLQTVVTDRPQPWLRALRYKRAGET
YVMLVNEHPRESICCTVALARGERLCGTRLDLLNGTEPVAFDGALELAPFESCVVVLGTG
DEVGLDDGANTNADDAVCLSIDGPWTVALSPAGSDGTFGEPQKLEQLCDLTAEQFAGICG
TFHYRTSFELTDDLAHTAIDLGDVYEVATLTLDGQTLGTRICPPYRFATGALAAGTHELT
IDVINTLDHAIPDIFALTEPVAPSGVLGPVTLLGQNLPK

Enzyme Prediction     

No EC number prediction in MGYG000003657_00003.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	26	693	2.2e-59	0.8252427184466019

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	5.43e-05	244	419	579	755	alpha-L-rhamnosidase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ATP54541.1	0.0	1	699	158	855
AZH68834.1	0.0	3	694	167	863
QNM10672.1	6.93e-234	3	692	161	832
AGF57028.1	4.28e-188	3	693	160	846
AZS14314.1	2.84e-161	1	693	172	873

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Q2F_A	5.89e-06	252	696	653	1142	Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000066	0.000001	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003657_00003.