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CAZyme Information: MGYG000003669_01344
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UMGS1933 sp900772235 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; TANB77; CAG-508; UMGS1933; UMGS1933 sp900772235 | |||||||||||
| CAZyme ID | MGYG000003669_01344 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 15589; End: 22776 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 1.47e-79 | 1102 | 1621 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| smart00490 | HELICc | 1.60e-08 | 2003 | 2089 | 1 | 82 | helicase superfamily c-terminal domain. |
| smart00487 | DEXDc | 1.88e-07 | 1567 | 1668 | 9 | 110 | DEAD-like helicases superfamily. |
| cd18011 | DEXDc_RapA | 9.13e-07 | 1567 | 1625 | 1 | 61 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
| COG0286 | HsdM | 1.09e-06 | 884 | 1079 | 155 | 375 | Type I restriction-modification system, DNA methylase subunit [Defense mechanisms]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 2.32e-318 | 806 | 2311 | 1548 | 3142 |
| QIW86704.1 | 1.03e-317 | 806 | 2311 | 1616 | 3210 |
| QIW86628.1 | 1.03e-317 | 806 | 2311 | 1616 | 3210 |
| AEY69616.1 | 3.88e-299 | 813 | 2317 | 1696 | 3292 |
| AXF51455.1 | 1.72e-294 | 813 | 2352 | 1789 | 3419 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 2.45e-32 | 843 | 2141 | 68 | 1569 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
| Q60354 | 4.10e-07 | 848 | 990 | 14 | 165 | Putative methyltransferase MJ0046 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0046 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000067 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |