CAZyme Information: MGYG000003681_00213

Basic Information

• Species: Bacteroides stercoris
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides stercoris
• CAZyme ID: MGYG000003681_00213
• CAZy Family: PL1
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
562	MGYG000003681_1|CGC5	61352.91	4.8461

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003681	3833391	Isolate	China	Asia

• Gene Location: Start: 261927; End: 263615 Strand: -

Full Sequence      

MKGIYWLFYLLFVLGFGVISCSGDNPIVDSEGNIGSNGDDESNGEENGSPDTGVKTLDYG
ELFAFPYAEGHGRNATGGRGGAVYVVTRLDDPASKPEGTLRYAVEKSGARTVVFAISGTI
MLERELKTKNDNLTIAGQTSPGGICIANYPFTINSDNVIIRFIRFRPGNINTDNDGLGGS
DNKNIIIDHCSVSWGTDEGLSVYGSEYTTVQWCLVAQSLRATPAKITGEKFNTHGYGGNW
GGHYASYHHNIIAHCESRVPRLGPRYTTLALDKGELVDIRNNVYYNYAGEGCYGGEAQKV
NLVNNYYKPGPATKLFTGSKEKRQYRIAKPDVYPKDYSGADYKKWLQTWGRFYVSGNCVE
GYSDVTADNWQDGVFGQMDAKNCEGGESSALWKEHTSIKVNSPVSGAGHVTTHSAVDAYD
MVLQYAGACNYRDKLDELIISDVRKGVATCTGSAKEWESLKGWSDNKPGYINKPSDIGTN
AGQLDEKGFPVLATDTEICTEDTDSDGIPDYWEKEYGLDFKKNDANERTVDVNGKYTNIE
MYMNSLVHGIMEAGSKGGAVAD

Enzyme Prediction     

No EC number prediction in MGYG000003681_00213.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL1	117	307	1.2e-68	0.994535519125683

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3866	PelB	5.74e-09	76	325	49	291	Pectate lyase [Carbohydrate transport and metabolism].
smart00656	Amb_all	8.55e-09	128	291	13	173	Amb_all domain.
pfam00544	Pec_lyase_C	0.003	154	286	58	190	Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIU94506.1	3.71e-258	12	562	11	544
QRQ55766.1	4.21e-245	20	562	22	553
SCV08374.1	4.21e-245	20	562	22	553
ALJ48956.1	4.21e-245	20	562	22	553
QUT78077.1	9.80e-244	20	562	22	553

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
B8NQQ7	1.22e-40	62	547	20	414	Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83	2.17e-39	62	547	20	414	Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
B0XMA2	1.28e-36	62	547	21	415	Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88	1.28e-36	62	547	21	415	Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
A1DPF0	2.20e-35	62	547	21	415	Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000659	0.170458	0.828561	0.000107	0.000097	0.000100

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003681_00213.