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CAZyme Information: MGYG000003681_00546

You are here: Home > Sequence: MGYG000003681_00546

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides stercoris
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides stercoris
CAZyme ID MGYG000003681_00546
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
600 MGYG000003681_2|CGC4 67623.11 9.1917
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003681 3833391 Isolate China Asia
Gene Location Start: 226749;  End: 228551  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003681_00546.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK06347 PRK06347 4.87e-11 31 231 332 545
1,4-beta-N-acetylmuramoylhydrolase.
pfam01476 LysM 8.44e-11 32 74 1 43
LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
PRK06347 PRK06347 1.17e-10 32 184 408 568
1,4-beta-N-acetylmuramoylhydrolase.
cd00118 LysM 1.19e-10 32 73 3 45
Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
smart00257 LysM 2.94e-10 32 73 2 44
Lysin motif.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRQ47535.1 0.0 1 600 1 600
QUT46797.1 0.0 1 600 1 600
BBK88149.1 0.0 1 600 1 596
QUT36281.1 0.0 1 600 1 596
QUT67528.1 0.0 1 600 1 596

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000669 0.436214 0.562391 0.000277 0.000244 0.000210

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003681_00546.