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CAZyme Information: MGYG000003681_01199

You are here: Home > Sequence: MGYG000003681_01199

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides stercoris
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides stercoris
CAZyme ID MGYG000003681_01199
CAZy Family PL13
CAZyme Description Heparin lyase I
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
392 MGYG000003681_5|CGC1 44291.43 9.1021
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003681 3833391 Isolate China Asia
Gene Location Start: 30672;  End: 31850  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.7

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL13 26 389 2.1e-206 0.977961432506887

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14099 Polysacc_lyase 2.35e-18 54 382 9 201
Polysaccharide lyase. This family includes heparin lyase I, EC:4.2.2.7. Heparin lyase I depolymerizes heparin by cleaving the glycosidic linkage next to an iduronic acid moiety. The structure of heparin lyase I consists of a beta-jelly roll domain with a long, deep substrate-binding groove and an unusual thumb domain containing many basic residues extending from the main body of the enzyme. This family also includes glucuronan lyase, EC:4.2.2.14. The structure glucuronan lyase is a beta-jelly roll.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADL62736.1 4.45e-298 1 392 1 392
QUT44448.1 2.37e-273 1 389 1 389
QRQ49642.1 5.59e-272 1 389 1 389
QRQ56254.1 6.44e-250 1 389 1 387
SCV08896.1 6.44e-250 1 389 1 387

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3IMN_A 2.86e-244 20 389 2 371
Crystalstructure of heparin lyase I from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron],3IN9_A Crystal structure of heparin lyase I complexed with disaccharide heparin [Bacteroides thetaiotaomicron]
3IKW_A 3.50e-244 21 389 1 369
Structureof Heparinase I from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron]
3INA_A 9.55e-243 20 389 2 371
Crystalstructure of heparin lyase I H151A mutant complexed with a dodecasaccharide heparin [Bacteroides thetaiotaomicron]
3ILR_A 1.67e-241 25 389 1 365
Structureof Heparinase I from Bacteroides thetaiotaomicron in complex with tetrasaccharide product [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q05819 1.69e-174 36 389 32 377
Heparin lyase I OS=Pedobacter heparinus OX=984 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000217 0.131298 0.868271 0.000071 0.000089 0.000062

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003681_01199.