CAZyme Information: MGYG000003682_00671

Basic Information

• Species: Ruthenibacterium lactatiformans
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruthenibacterium; Ruthenibacterium lactatiformans
• CAZyme ID: MGYG000003682_00671
• CAZy Family: GT2
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
622	MGYG000003682_2|CGC1	68721.85	8.1682

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000003682	3961825	Isolate	China	Asia

• Gene Location: Start: 57343; End: 59211 Strand: -

Full Sequence      

MPEENTPKNPAEHDSFAKALRRTACPAHFASLARRAAACLRERGAEALWREASFRISLMT
KGEVWRFRADIPLRRELKAQRAARFARMPLVSVVVPLYNTPPKFLREMMRSVLGQTYAGL
ELVLADASDAAHGEVEKAVRAVRDARVRYIRLAKNGGIAENTNAALAAAQGEYIALLDHD
DVLTPNALYEAVKAVNEQGADFVYSDEIVLDSTLKKLGEYHFKPDFSPDTLRGCNYITHL
AVFSRALLAAAGGGERAEFDGAQDFDLILRLTERAQKVAHVPKVLYWWRGHGGSTASGMQ
AKPYALAAGAAAVEAQLLRLGMPGRVEPIPGSPGAYRTRYDVTRPGRVTVLIPNKDHSED
LARCLESLYRNAGWDDLEVLVLENNSTQAETFACYGRAQQQYPNCRVLTYKGGFNFSAIN
NFGARHATGAHLLLLNNDIQVETPGFVRELLSYSQRPDVGAVGAKLFYPDGTIQHAGVFI
GLGGSAGHSHKGHPRDSGGDMYRLATTQNMCAVTGACLMVKKELYDRFGGLDEENFAVAY
NDVDFCLRLWQSGLLNVMTPFAAAVHHESKSRGDDTRAGGEKQARYEREKARFCARYAGL
MQQGDPYYNPHFTLLYENYGYK

Enzyme Prediction     

No EC number prediction in MGYG000003682_00671.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT2	92	204	1.8e-25	0.6588235294117647
GT2	345	592	2.4e-16	0.9782608695652174

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd04184	GT2_RfbC_Mx_like	1.98e-90	89	289	1	201	Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
cd04186	GT_2_like_c	5.44e-41	350	568	1	166	Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
COG1216	GT2	2.84e-26	347	574	4	227	Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism].
cd06433	GT_2_WfgS_like	3.92e-26	92	295	1	200	WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
pfam00535	Glycos_transf_2	1.76e-23	92	248	1	164	Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUC66692.1	8.37e-177	76	622	403	946
AXB29591.1	1.95e-176	76	621	253	798
CBL00720.1	1.95e-176	76	621	253	798
CBK99960.1	8.74e-176	76	622	257	803
AXA81613.1	2.46e-175	78	622	246	803

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P55465	3.03e-119	84	614	361	890	Uncharacterized protein y4gI OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a03550 PE=4 SV=1
Q50864	1.71e-93	72	614	302	833	O-antigen biosynthesis protein RfbC OS=Myxococcus xanthus OX=34 GN=rfbC PE=4 SV=1
A0A0H2UR96	1.26e-13	90	231	4	144	Glycosyltransferase GlyG OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=glyG PE=1 SV=1
Q9CMP0	2.41e-12	87	295	431	636	Chondroitin synthase OS=Pasteurella multocida (strain Pm70) OX=272843 GN=fcbD PE=3 SV=1
Q7BLV3	2.42e-12	87	295	438	643	Hyaluronan synthase OS=Pasteurella multocida OX=747 GN=hyaD PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000046	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000003682_00671.