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CAZyme Information: MGYG000003682_01113

You are here: Home > Sequence: MGYG000003682_01113

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruthenibacterium lactatiformans
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruthenibacterium; Ruthenibacterium lactatiformans
CAZyme ID MGYG000003682_01113
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
403 MGYG000003682_4|CGC2 43006.69 4.3796
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003682 3961825 Isolate China Asia
Gene Location Start: 61911;  End: 63122  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003682_01113.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 135 360 7.2e-44 0.9722222222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00933 Glyco_hydro_3 2.35e-66 81 395 1 316
Glycosyl hydrolase family 3 N terminal domain.
COG1472 BglX 1.45e-62 80 402 1 318
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK05337 PRK05337 1.84e-46 109 374 27 292
beta-hexosaminidase; Provisional
PRK15098 PRK15098 5.51e-21 73 402 38 359
beta-glucosidase BglX.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI61427.1 4.00e-162 72 401 152 481
QNM02560.1 1.22e-147 74 403 90 419
QWT55932.1 2.40e-140 73 401 108 436
QHQ63470.1 8.32e-136 74 401 86 413
SET88834.1 1.27e-127 58 401 71 416

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6K5J_A 1.62e-42 80 398 11 339
Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
3BMX_A 5.45e-36 76 402 38 399
Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A 2.18e-35 76 402 12 373
ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A 2.66e-35 76 402 42 403
Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
6GFV_A 2.69e-33 78 396 14 337
Mtuberculosis LpqI [Mycobacterium tuberculosis H37Rv],6GFV_B M tuberculosis LpqI [Mycobacterium tuberculosis H37Rv]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40406 2.99e-35 76 402 38 399
Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
B0RX17 1.17e-34 108 359 24 275
Beta-hexosaminidase OS=Xanthomonas campestris pv. campestris (strain B100) OX=509169 GN=nagZ PE=3 SV=1
Q4USG7 1.17e-34 108 359 24 275
Beta-hexosaminidase OS=Xanthomonas campestris pv. campestris (strain 8004) OX=314565 GN=nagZ PE=3 SV=1
Q8PB42 1.17e-34 108 359 24 275
Beta-hexosaminidase OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=nagZ PE=3 SV=1
Q0AF74 2.29e-33 108 363 28 285
Beta-hexosaminidase OS=Nitrosomonas eutropha (strain DSM 101675 / C91 / Nm57) OX=335283 GN=nagZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.939593 0.016823 0.028425 0.000203 0.000091 0.014889

TMHMM  Annotations      download full data without filtering help

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