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CAZyme Information: MGYG000003682_03138

You are here: Home > Sequence: MGYG000003682_03138

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruthenibacterium lactatiformans
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruthenibacterium; Ruthenibacterium lactatiformans
CAZyme ID MGYG000003682_03138
CAZy Family GH3
CAZyme Description Beta-N-acetylglucosaminidase/beta-glucosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
589 MGYG000003682_29|CGC1 64556.28 4.9898
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003682 3961825 Isolate China Asia
Gene Location Start: 3570;  End: 5339  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000003682_03138.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 78 313 4.6e-50 0.9768518518518519

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00933 Glyco_hydro_3 1.45e-57 27 349 1 316
Glycosyl hydrolase family 3 N terminal domain.
COG1472 BglX 9.03e-53 26 373 1 335
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK05337 PRK05337 3.85e-27 120 319 99 284
beta-hexosaminidase; Provisional
PRK15098 PRK15098 6.66e-16 12 404 31 407
beta-glucosidase BglX.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEN95878.1 1.84e-280 1 588 1 594
ALC92197.1 4.28e-211 2 589 4 586
QPB43581.1 1.22e-210 2 589 3 586
AVM68289.1 1.55e-205 1 583 1 578
QQJ89971.1 6.43e-203 2 589 3 586

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5VQD_A 1.26e-116 4 589 6 567
Beta-glucosidephosphorylase BglX [unidentified],5VQE_A Beta-glucoside phosphorylase BglX bound to 2FGlc [unidentified]
3BMX_A 8.43e-39 26 415 42 458
Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A 3.08e-38 26 415 16 432
ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A 4.04e-38 26 415 46 462
Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
6K5J_A 1.11e-35 26 407 11 396
Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q7WUL3 3.98e-122 1 589 1 564
Beta-N-acetylglucosaminidase/beta-glucosidase OS=Cellulomonas fimi OX=1708 GN=nag3 PE=1 SV=1
P40406 4.62e-38 26 415 42 458
Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
C4LEY6 4.10e-24 75 317 47 279
Beta-hexosaminidase OS=Tolumonas auensis (strain DSM 9187 / TA4) OX=595494 GN=nagZ PE=3 SV=1
Q31G32 5.90e-24 118 357 107 329
Beta-hexosaminidase OS=Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-2) OX=317025 GN=nagZ PE=3 SV=1
P96157 1.43e-22 74 338 46 295
Beta-hexosaminidase OS=Vibrio furnissii OX=29494 GN=nagZ PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000057 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003682_03138.