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CAZyme Information: MGYG000003683_00028

You are here: Home > Sequence: MGYG000003683_00028

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium pseudocatenulatum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium pseudocatenulatum
CAZyme ID MGYG000003683_00028
CAZy Family GH51
CAZyme Description Intracellular exo-alpha-L-arabinofuranosidase 2
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
518 MGYG000003683_1|CGC1 58210.1 4.495
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003683 2206268 Isolate China Asia
Gene Location Start: 35654;  End: 37210  Strand: +

Full Sequence      Download help

MVVCIDPNST  IGRIDPKLHG  QFIEFLGECI  DEGLWVGEDS  PIENERGYRK  ATLDALRALQ60
PPVIRWPGGC  YADTYHWRDG  VGPQSERKTT  FNENFATYEL  DDHSFGTDEF  LRLCEMLGAE120
PWININMLSG  TVAEMKDWME  YCNRAQPTDL  AKEREANGHK  APYGVKYWGI  GNEVWAGGGT180
MTPRTYLNEY  RRFASAMPSF  TTDVFAPTPM  YAIASGPDGN  KPRERVQWTQ  DFFRGLAEYR240
QPNIDGYDLH  FYNWNVDNDA  DTPTRFDEDG  WNAVIEGCLE  LEDILRDQWR  LMNDGLALIH300
EPEVAMDSKL  AHVDLIIGEW  GNWHKTAFFA  RPALKQQVTM  RDAITTALTL  DLLQRNCDKV360
TMACNAQTIN  VLNSLILTEG  DRTILTPNYD  VFMMYKAHRG  MTALDVARND  SEDSAVYTFA420
SRNEDGTQLL  INLTNAHMND  GAEVRLHLPC  GAQVDSMETL  ASEDPHDCNT  VEHSDLVRTH480
AVDVDSAVSV  HESAGGAELT  VTLPAASVSA  LHVTIRQR518

Enzyme Prediction      help

EC 3.2.1.55

CAZyme Signature Domains help

Created with Snap2551771031291551812072332592843103363623884144404664924514GH51
Family Start End Evalue family coverage
GH51 4 514 2.5e-116 0.7222222222222222

CDD Domains      download full data without filtering help

Created with Snap2551771031291551812072332592843103363623884144404664925514AbfA318507Alpha-L-AF_C318507Alpha-L-AF_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3534 AbfA 8.27e-110 5 514 8 499
Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism].
pfam06964 Alpha-L-AF_C 7.21e-43 318 507 1 192
Alpha-L-arabinofuranosidase C-terminal domain. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides.
smart00813 Alpha-L-AF_C 1.95e-38 318 507 1 189
Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides.

CAZyme Hits      help

Created with Snap2551771031291551812072332592843103363623884144404664921518QTL81280.1|GH511518BAR02272.1|GH511518QGM63180.1|GH511518AZN75185.1|GH511518BAF39986.1|GH51|3.2.1.55
Hit ID E-Value Query Start Query End Hit Start Hit End
QTL81280.1 0.0 1 518 1 518
BAR02272.1 0.0 1 518 1 518
QGM63180.1 0.0 1 518 1 518
AZN75185.1 0.0 1 518 1 518
BAF39986.1 0.0 1 518 1 518

PDB Hits      download full data without filtering help

Created with Snap25517710312915518120723325928431033636238841444046649234486ZT8_A34486ZT6_A34482VRQ_A34486ZTA_A34482VRK_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6ZT8_A 5.94e-98 3 448 7 433
ChainA, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT8_B Chain B, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT8_C Chain C, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT9_A Chain A, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT9_B Chain B, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT9_C Chain C, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus]
6ZT6_A 1.18e-97 3 448 7 433
ChainA, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT6_B Chain B, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT6_C Chain C, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT7_A Chain A, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT7_B Chain B, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZT7_C Chain C, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus]
2VRQ_A 1.18e-97 3 448 7 433
StructureOf An Inactive Mutant Of Arabinofuranosidase From Thermobacillus Xylanilyticus In Complex With A Pentasaccharide [Thermobacillus xylanilyticus],2VRQ_B Structure Of An Inactive Mutant Of Arabinofuranosidase From Thermobacillus Xylanilyticus In Complex With A Pentasaccharide [Thermobacillus xylanilyticus],2VRQ_C Structure Of An Inactive Mutant Of Arabinofuranosidase From Thermobacillus Xylanilyticus In Complex With A Pentasaccharide [Thermobacillus xylanilyticus]
6ZTA_A 9.24e-97 3 448 7 433
ChainA, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZTA_B Chain B, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus],6ZTA_C Chain C, Alpha-L-arabinofuranosidase [Thermobacillus xylanilyticus]
2VRK_A 7.51e-92 3 448 7 433
Structureof a seleno-methionyl derivative of wild type arabinofuranosidase from Thermobacillus xylanilyticus [Thermobacillus xylanilyticus],2VRK_B Structure of a seleno-methionyl derivative of wild type arabinofuranosidase from Thermobacillus xylanilyticus [Thermobacillus xylanilyticus],2VRK_C Structure of a seleno-methionyl derivative of wild type arabinofuranosidase from Thermobacillus xylanilyticus [Thermobacillus xylanilyticus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap25517710312915518120723325928431033636238841444046649214478sp|Q59219|IABF_BACOV5448sp|P94552|IABF2_BACSU5451sp|Q0D1I6|ABFC_ASPTN3469sp|A2QQ94|ABFC_ASPNC3402sp|B8NIX4|ABFC_ASPFN
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q59219 8.70e-92 14 478 37 485
Intracellular exo-alpha-L-arabinofuranosidase OS=Bacteroides ovatus OX=28116 GN=asdII PE=3 SV=1
P94552 1.35e-84 5 448 8 431
Intracellular exo-alpha-L-arabinofuranosidase 2 OS=Bacillus subtilis (strain 168) OX=224308 GN=abf2 PE=1 SV=2
Q0D1I6 7.26e-59 5 451 17 454
Probable alpha-L-arabinofuranosidase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=abfC PE=3 SV=1
A2QQ94 2.01e-58 3 469 15 470
Probable alpha-L-arabinofuranosidase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=abfC PE=3 SV=1
B8NIX4 1.47e-56 3 402 15 392
Probable alpha-L-arabinofuranosidase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=abfC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000042 0.000006 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003683_00028.