logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000003683_00033

You are here: Home > Sequence: MGYG000003683_00033

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium pseudocatenulatum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium pseudocatenulatum
CAZyme ID MGYG000003683_00033
CAZy Family GH3
CAZyme Description Beta-glucosidase BoGH3B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
787 MGYG000003683_1|CGC1 85317.13 4.4722
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000003683 2206268 Isolate China Asia
Gene Location Start: 42656;  End: 45019  Strand: +

Full Sequence      Download help

MRKVSNPMTE  TIENTANLPY  KNPELPTEER  IADLLGRMTL  EEKVGQMMQL  DARSGDLDDL60
IVNKHVGSIL  HTSPSDLPKA  VETVNTKTRL  GIPLVIGDDC  IHGYSFWPGA  TIFPEQLGMA120
TTWDSEKVQA  AGRATAEEVS  TTGVHWTFSP  VLCIARDTRW  GRVGETFGED  PYLIGEMASS180
IVKGYQGGAK  AGEPLAKDAI  LACAKHFAGY  SETQGGRDAS  EADLSHRKLE  SWFLPPFERV240
AKEGCGTFML  GYESIEGVPV  TFNKWLLSDR  LRGAWNYQGT  LITDWDNVGR  SVWEQKVKPD300
YVQAAADAVK  SGNDLVMTTP  KFYEGAIEAV  KTGLLDESLI  DAAVARILAL  KFRLGLFEDP360
RLPDQERINA  VIGSEEHQQL  NLEVAREAVA  LLKNNGSLPF  NAAGAKRIAV  VGPLADDAQT420
QLGDWAGSSG  QINWMPDGHP  REMITTVLDG  FKQLSPEGCE  VVYSRGANIV  DLVPDPEGEF480
YPDGQPRPKI  GVSAKLDRAL  LDEAVENARQ  SDLIVAVVGD  VIQAIGEGCS  TATLELLGGQ540
NALIDALSNV  ARETGKPFVV  VLVSSKPQVL  PASVIGTNGV  IVDETPAEGT  SALLWAPSPG600
MKGGQAIAEI  ILGETEPSGR  LPITFPRHAG  QLPVYYNQIR  GQHGNRYADL  TQNPAFAFGE660
GLSYTTFEYG  EPTVTNVPES  GMFAETDTVH  AEITLTNTGD  RKGTEVVQLY  IGDIVTSYSW720
TDRELKAFQR  VELEPGESKT  VAFDIPVSDC  TIVDSEANRI  VEPGEFEVLI  GHSSRREDLK780
RTTFTVA787

Enzyme Prediction      help

EC 3.2.1.21

CAZyme Signature Domains help

Created with Snap397811815719623627531435439343247251155059062966870874786317GH3
Family Start End Evalue family coverage
GH3 86 317 8.7e-69 0.9814814814814815

CDD Domains      download full data without filtering help

Created with Snap397811815719623627531435439343247251155059062966870874716785PRK1509838461BglX19771PLN0308039350Glyco_hydro_3391664Glyco_hydro_3_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 4.23e-178 16 785 20 763
beta-glucosidase BglX.
COG1472 BglX 3.39e-87 38 461 1 397
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PLN03080 PLN03080 1.11e-71 19 771 41 769
Probable beta-xylosidase; Provisional
pfam00933 Glyco_hydro_3 2.63e-68 39 350 1 316
Glycosyl hydrolase family 3 N terminal domain.
pfam01915 Glyco_hydro_3_C 2.94e-46 391 664 3 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Created with Snap39781181571962362753143543934324725115505906296687087471787QTL81275.1|GH31787AZN75181.1|GH38787AVT45725.1|GH38787AII76755.1|GH38787AZH71894.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
QTL81275.1 0.0 1 787 1 787
AZN75181.1 0.0 1 787 1 787
AVT45725.1 0.0 8 787 1 780
AII76755.1 0.0 8 787 1 780
AZH71894.1 0.0 8 787 1 780

PDB Hits      download full data without filtering help

Created with Snap3978118157196236275314354393432472511550590629668708747187875Z9S_A287836R5I_A227836R5P_A287836R5O_A287836R5R_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5Z9S_A 0.0 18 787 15 788
Functionaland Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria [Bifidobacterium longum],5Z9S_B Functional and Structural Characterization of a beta-Glucosidase Involved in Saponin Metabolism from Intestinal Bacteria [Bifidobacterium longum]
6R5I_A 1.17e-128 28 783 4 731
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5P_A 1.98e-128 22 783 29 763
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5P_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A 6.42e-128 28 783 4 731
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5R_A 6.60e-128 28 783 5 732
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Created with Snap397811815719623627531435439343247251155059062966870874720776sp|Q56078|BGLX_SALTY9786sp|T2KMH0|PLH24_FORAG20776sp|P33363|BGLX_ECOLI31772sp|Q23892|GLUA_DICDI15784sp|T2KMH9|PLH34_FORAG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56078 2.48e-125 20 776 24 756
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
T2KMH0 1.52e-121 9 786 16 722
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
P33363 6.44e-121 20 776 24 756
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
Q23892 1.64e-101 31 772 80 813
Lysosomal beta glucosidase OS=Dictyostelium discoideum OX=44689 GN=gluA PE=1 SV=2
T2KMH9 7.27e-86 15 784 24 752
Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000052 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000003683_00033.